RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ARV1Q9H2C2 271 aa5.25□□□□□ -1.57
TRAPPC13-202ENST00000399438 C14orf105Q9NVL8 296 aa5.25□□□□□ -1.57
TRAPPC13-202ENST00000399438 TAS2R5Q9NYW4 299 aa5.25□□□□□ -1.57
TRAPPC13-202ENST00000399438 TAS2R4Q9NYW5 299 aa5.25□□□□□ -1.57
TRAPPC13-202ENST00000399438 UFC1Q9Y3C8 167 aa5.25□□□□□ -1.57
TRAPPC13-202ENST00000399438 V9GY05 133 aa5.25□□□□□ -1.57
TRAPPC13-202ENST00000399438 TMED7-TICAM2A0A0A6YYA0 188 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 C5orf63A6NC05 138 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 OR6C6A6NF89 314 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 TLCD2A6NGC4 264 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 CDC14BO60729 498 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 HLA-DQB1P01920 261 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 GABRR1P24046 479 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 CHATP28329 748 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 CXCL12P48061 93 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 P2RX1P51575 399 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 MFAP5Q13361 173 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 EIF2B1Q14232 305 aaKnown RBP5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 MPPED2Q15777 294 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 SCGB2B2Q4G0G5 96 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 FTMTQ8N4E7 242 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 SMIM20Q8N5G0 67 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 OR11G2Q8NGC1 345 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 KLRF1Q9NZS2 232 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 KMT2EQ8IZD2 1858 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 A0A1W2PP11 408 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 MPDU1O75352 247 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 ARL6IP5O75915 188 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 ZNF250P15622 560 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 PTH2RP49190 550 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 HILS1P60008 231 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 SMIM21Q3B7S5 101 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 ANXA2RQ3ZCQ2 193 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 C14orf28Q4W4Y0 310 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 RPL22L1Q6P5R6 122 aaKnown RBP5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 LINC00114Q6XXX2 140 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 GRINAQ7Z429 371 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 C9orf62Q8N4C0 152 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 TMEM105Q8N8V8 129 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 LRTM2Q8N967 370 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 OR14K1Q8NGZ2 314 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 COQ8AQ8NI60 647 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 HAVCR2Q8TDQ0 301 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 ATG5Q9H1Y0 275 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 AAMDCQ9H7C9 122 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 B3GNT2Q9NY97 397 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 GLTPQ9NZD2 209 aa5.24□□□□□ -1.57
TRAPPC13-202ENST00000399438 FXYD6-FXYD2A0A087WZ82 144 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 TMEM235A6NFC5 223 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 ZNF814B7Z6K7 855 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 KRT33AO76009 404 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 HOXC4P09017 264 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 GP1BBP13224 206 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 AKR1C3P42330 323 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 TMPRSS3P57727 454 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 TAS2R20P59543 309 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 FOXF1Q12946 379 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 GSG1Q2KHT4 349 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 GLYATL3Q5SZD4 288 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 DUSP18Q8NEJ0 188 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 OR51S1Q8NGJ8 323 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 ZFAND1Q8TCF1 268 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 FXYD6Q9H0Q3 95 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 ZNF230Q9UIE0 474 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 POLR1DQ9Y2S0 133 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 TRBV5-7A0A0A0MS05 114 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 OR4C45A6NMZ5 311 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 UBL3O95164 117 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 MPC2O95563 127 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 RENP00797 406 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 CD3DP04234 171 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 ASAH2BP0C7U1 165 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 PI3P19957 117 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 HOXD3P31249 432 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 OR3A3P47888 321 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 CFHR3Q02985 330 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 FAM27E3Q08E93 113 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 KLF9Q13886 244 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 CEACAM21Q3KPI0 293 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 ALKAL2Q6UX46 152 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 CREB3L2Q70SY1 520 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 EIF4E3Q8N5X7 224 aaKnown RBP5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 GVQW1Q8N7I0 195 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 CHST4Q8NCG5 386 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 ST6GALNAC3Q8NDV1 305 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 OR1S2Q8NGQ3 325 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 OR1P1Q8NH06 330 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 PTGES2Q9H7Z7 377 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 NOX3Q9HBY0 568 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 FBXL2Q9UKC9 423 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 SPTA1P02549 2419 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 CENPVL3A0A0U1RRI6 287 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 ANKRD20A5PA0PJZ0 165 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 S1PR2O95136 353 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 ALOX5APP20292 161 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 RFC3P40938 356 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 PPICP45877 212 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 TAS2R43P59537 309 aa5.23□□□□□ -1.57
TRAPPC13-202ENST00000399438 NHLH2Q02577 135 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms