RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 CCL20P78556 96 aa19.53■□□□□ 0.72
RABGGTA-202ENST00000399409 RBMXL1Q96E39 390 aaKnown RBP19.53■□□□□ 0.72
RABGGTA-202ENST00000399409 PPP1R3CQ9UQK1 317 aa19.53■□□□□ 0.72
RABGGTA-202ENST00000399409 IGKV1-39P01597 117 aa19.52■□□□□ 0.72
RABGGTA-202ENST00000399409 IGKV1D-39P04432 117 aa19.52■□□□□ 0.72
RABGGTA-202ENST00000399409 ZNF295-AS1Q8N0V1 137 aa19.52■□□□□ 0.72
RABGGTA-202ENST00000399409 RARRES2Q99969 163 aa19.52■□□□□ 0.72
RABGGTA-202ENST00000399409 CACNG5Q9UF02 275 aa19.52■□□□□ 0.72
RABGGTA-202ENST00000399409 KCNS2Q9ULS6 477 aa19.52■□□□□ 0.72
RABGGTA-202ENST00000399409 R4GN57 208 aa19.52■□□□□ 0.72
RABGGTA-202ENST00000399409 TRAV39A0A0B4J263 110 aa19.51■□□□□ 0.71
RABGGTA-202ENST00000399409 SYNGR2O43760 224 aa19.51■□□□□ 0.71
RABGGTA-202ENST00000399409 HABP2Q14520 560 aaPredicted RBP19.51■□□□□ 0.71
RABGGTA-202ENST00000399409 Q6ZT83 130 aa19.51■□□□□ 0.71
RABGGTA-202ENST00000399409 FAM214BQ7L5A3 538 aa19.51■□□□□ 0.71
RABGGTA-202ENST00000399409 TMPRSS7Q7RTY8 843 aa19.51■□□□□ 0.71
RABGGTA-202ENST00000399409 ESPL1Q14674 2120 aa19.51■□□□□ 0.71
RABGGTA-202ENST00000399409 RPL35P42766 123 aaKnown RBP19.51■□□□□ 0.71
RABGGTA-202ENST00000399409 PRR18Q8N4B5 295 aa19.51■□□□□ 0.71
RABGGTA-202ENST00000399409 ZNF561Q8N587 486 aa19.51■□□□□ 0.71
RABGGTA-202ENST00000399409 KCNIP1Q9NZI2 227 aa19.51■□□□□ 0.71
RABGGTA-202ENST00000399409 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 CEACAM6P40199 344 aa19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 ERVS71-1P61550 626 aa19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 RUNX1Q01196 453 aa19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 PSG7Q13046 419 aa19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 Q6ZRM9 215 aa19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 ZFP82Q8N141 532 aa19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 C2CD4CQ8TF44 421 aa19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 C20orf24Q9BUV8 137 aa19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 HES4Q9HCC6 221 aa19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 LYZL6O75951 148 aa19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 HAND1O96004 215 aa19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 IGKV1-5P01602 117 aa19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 CBR1P16152 277 aa19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 ZNF506Q5JVG8 444 aa19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 SLC25A24Q6NUK1 477 aa19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 ZBTB34Q8NCN2 500 aa19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 ESRP2Q9H6T0 727 aaKnown RBP19.5■□□□□ 0.71
RABGGTA-202ENST00000399409 TRAV1-1A0A0B4J248 108 aa19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 TMEM30CPA0ZSE6 113 aa19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 PMP22Q01453 160 aa19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 GUSBP1Q15486 140 aa19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 TRIP6Q15654 476 aaKnown RBP19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 ALKBH6Q3KRA9 238 aa19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 ZNF585BQ52M93 769 aa19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 PSENENQ9NZ42 101 aa19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 HSPB1P04792 205 aaKnown RBP19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 GRPP07492 148 aa19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 SRP19P09132 144 aaKnown RBP19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 TUBG1P23258 451 aa19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 TMEM267Q0VDI3 215 aaPredicted RBP19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 THNSL2Q86YJ6 484 aa19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 DRAM1Q8N682 238 aa19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 SCGB1C1Q8TD33 95 aa19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 SFT2D1Q8WV19 159 aa19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 TRIB1Q96RU8 372 aa19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 TUBG2Q9NRH3 451 aa19.49■□□□□ 0.71
RABGGTA-202ENST00000399409 KNTC1P50748 2209 aa19.48■□□□□ 0.71
RABGGTA-202ENST00000399409 FAM90A26D6RGX4 464 aa19.48■□□□□ 0.71
RABGGTA-202ENST00000399409 COA4Q9NYJ1 87 aa19.48■□□□□ 0.71
RABGGTA-202ENST00000399409 RNF150Q9ULK6 438 aa19.48■□□□□ 0.71
RABGGTA-202ENST00000399409 GPR179Q6PRD1 2367 aa19.48■□□□□ 0.71
RABGGTA-202ENST00000399409 A0A1W2PPH5 198 aa19.48■□□□□ 0.71
RABGGTA-202ENST00000399409 ZNF98A6NK75 572 aa19.48■□□□□ 0.71
RABGGTA-202ENST00000399409 OR8U8P0C7N1 319 aa19.48■□□□□ 0.71
RABGGTA-202ENST00000399409 ZNF16P17020 682 aaPredicted RBP19.48■□□□□ 0.71
RABGGTA-202ENST00000399409 AGAP20933 346 aa19.48■□□□□ 0.71
RABGGTA-202ENST00000399409 IQCF2Q8IXL9 164 aa19.48■□□□□ 0.71
RABGGTA-202ENST00000399409 C1orf162Q8NEQ5 155 aaPredicted RBP19.48■□□□□ 0.71
RABGGTA-202ENST00000399409 KLF14Q8TD94 323 aaPredicted RBP19.48■□□□□ 0.71
RABGGTA-202ENST00000399409 OR14J1Q9UGF5 321 aa19.48■□□□□ 0.71
RABGGTA-202ENST00000399409 H3BP45 60 aa19.47■□□□□ 0.71
RABGGTA-202ENST00000399409 SCAF4O95104 1147 aaKnown RBP19.47■□□□□ 0.71
RABGGTA-202ENST00000399409 HOXC12P31275 282 aa19.47■□□□□ 0.71
RABGGTA-202ENST00000399409 HBG1P69891 147 aa19.47■□□□□ 0.71
RABGGTA-202ENST00000399409 HBG2P69892 147 aa19.47■□□□□ 0.71
RABGGTA-202ENST00000399409 IZUMO4Q1ZYL8 232 aa19.47■□□□□ 0.71
RABGGTA-202ENST00000399409 SLC35E4Q6ICL7 350 aa19.47■□□□□ 0.71
RABGGTA-202ENST00000399409 GCNT2Q8N0V5 402 aa19.47■□□□□ 0.71
RABGGTA-202ENST00000399409 PSMG3Q9BT73 122 aaPredicted RBP19.47■□□□□ 0.71
RABGGTA-202ENST00000399409 OBP2BQ9NPH6 170 aa19.47■□□□□ 0.71
RABGGTA-202ENST00000399409 PUS1Q9Y606 427 aaKnown RBP eCLIP19.47■□□□□ 0.71
RABGGTA-202ENST00000399409 WDR1O75083 606 aa19.46■□□□□ 0.71
RABGGTA-202ENST00000399409 DAOP14920 347 aa19.46■□□□□ 0.71
RABGGTA-202ENST00000399409 RAB5AP20339 215 aa19.46■□□□□ 0.71
RABGGTA-202ENST00000399409 MAS1LP35410 378 aa19.46■□□□□ 0.71
RABGGTA-202ENST00000399409 ICAM4Q14773 271 aa19.46■□□□□ 0.71
RABGGTA-202ENST00000399409 HAGHQ16775 308 aa19.46■□□□□ 0.71
RABGGTA-202ENST00000399409 KRBOX4Q5JUW0 171 aa19.46■□□□□ 0.71
RABGGTA-202ENST00000399409 MALSU1Q96EH3 234 aa19.46■□□□□ 0.71
RABGGTA-202ENST00000399409 CXXC4Q9H2H0 198 aa19.46■□□□□ 0.71
RABGGTA-202ENST00000399409 MED12LQ86YW9 2145 aa19.46■□□□□ 0.71
RABGGTA-202ENST00000399409 A6NLC8 198 aa19.46■□□□□ 0.71
RABGGTA-202ENST00000399409 H0YL77 283 aa19.46■□□□□ 0.71
RABGGTA-202ENST00000399409 MPV17P39210 176 aa19.46■□□□□ 0.71
RABGGTA-202ENST00000399409 KHDC3LQ587J8 217 aa19.46■□□□□ 0.71
RABGGTA-202ENST00000399409 ZNF645Q8N7E2 425 aa19.46■□□□□ 0.71
RABGGTA-202ENST00000399409 CLDND2Q8NHS1 167 aa19.46■□□□□ 0.71
RABGGTA-202ENST00000399409 GALMQ96C23 342 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms