RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 IGHV4-61A0A0C4DH41 118 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 KBTBD11-OT1A0A1B0GTJ5 212 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 KIAA1324LA8MWY0 1029 aaPredicted RBP13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 F2RL2O00254 374 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 PHF1O43189 567 aaPredicted RBP13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 SPINT2O43291 252 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 NDUFB6O95139 128 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 TCRBP04435 133 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 IL2RGP31785 369 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 HTD2P86397 168 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 SCGB2B2Q4G0G5 96 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 ESCO2Q56NI9 601 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 CCBE1Q6UXH8 406 aaPredicted RBP13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 IDO2Q6ZQW0 420 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 TMEM17Q86X19 198 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 FAM185AQ8N0U4 392 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 RFESDQ8TAC1 157 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 GIMAP1Q8WWP7 306 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 GALMQ96C23 342 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 ZNF2Q9BSG1 426 aaPredicted RBP13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 TMPRSS13Q9BYE2 586 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 OR1A1Q9P1Q5 309 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 COPZ2Q9P299 210 aa13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 RPUSD1Q9UJJ7 312 aaKnown RBP13.94□□□□□ -0.18
TSPAN4-205ENST00000397406 A8MXK9 166 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 C22orf46C9J442 243 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 TUSC2O75896 110 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 CCL3L1P16619 93 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 NFYAP23511 347 aaPredicted RBP13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 FCGR2CP31995 323 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 DLX6P56179 175 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 RBMS2Q15434 407 aaKnown RBP13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 C11orf91Q3C1V1 193 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 AADACL3Q5VUY0 350 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 H1FOOQ8IZA3 346 aaPredicted RBP13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 LY6G5BQ8NDX9 201 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 OR6F1Q8NGZ6 308 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 OR10J5Q8NHC4 309 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 TERB2Q8NHR7 220 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 RAB39BQ96DA2 213 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 ZNF714Q96N38 554 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 TOLLIPQ9H0E2 274 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 SLC23A1Q9UHI7 598 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 ABCA2Q9BZC7 2435 aa13.93□□□□□ -0.18
TSPAN4-205ENST00000397406 OR5H14A6NHG9 310 aa13.92□□□□□ -0.18
TSPAN4-205ENST00000397406 SLC25A16P16260 332 aa13.92□□□□□ -0.18
TSPAN4-205ENST00000397406 OR52L2PQ8NGH6 319 aa13.92□□□□□ -0.18
TSPAN4-205ENST00000397406 UPRTQ96BW1 309 aa13.92□□□□□ -0.18
TSPAN4-205ENST00000397406 GINS4Q9BRT9 223 aa13.92□□□□□ -0.18
TSPAN4-205ENST00000397406 MMP28Q9H239 520 aa13.92□□□□□ -0.18
TSPAN4-205ENST00000397406 GAL3ST2Q9H3Q3 398 aa13.92□□□□□ -0.18
TSPAN4-205ENST00000397406 ZNF728P0DKX0 622 aa13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 AADACP22760 399 aa13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 OMGP23515 440 aa13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 ZBTB25P24278 435 aa13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 FPR2P25090 351 aa13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 ZFP36P26651 326 aaKnown RBP13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 LOXL3P58215 753 aa13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 GNMTQ14749 295 aa13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 CD276Q5ZPR3 534 aa13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 FAM53AQ6NSI3 398 aaPredicted RBP13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 PLET1Q6UQ28 207 aa13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 SLC25A21Q9BQT8 299 aaPredicted RBP13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 FXYD6Q9H0Q3 95 aa13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 RAB9BQ9NP90 201 aa13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 IDI2-AS1Q9NZ38 188 aa13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 JPT1Q9UK76 154 aa13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 NUBP2Q9Y5Y2 271 aa13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 CR1P17927 2039 aa13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 CUBNO60494 3623 aa13.91□□□□□ -0.18
TSPAN4-205ENST00000397406 LOC105371242A0A075B767 164 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 IGHV3-43A0A0B4J1X8 118 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 PPIAL4CA0A0B4J2A2 164 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 HSPA12AO43301 675 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 MMP23AO75900 390 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 PPYP01298 95 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 PPIAL4GP0DN37 164 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 IGHV3-43DP0DP04 118 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 LTC4SQ16873 150 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 HEPN1Q6WQI6 88 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 C11orf42Q8N5U0 333 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 OR10A7Q8NGE5 316 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 MARCH1Q8TCQ1 289 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 DACT3Q96B18 629 aaPredicted RBP13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 MOB3AQ96BX8 217 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 MARVELD1Q9BSK0 173 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 PARP12Q9H0J9 701 aaKnown RBP13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 C20orf85Q9H1P6 137 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 OR2S2Q9NQN1 319 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 NUDT15Q9NV35 164 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 RDH8Q9NYR8 311 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 ZNF69Q9UC07 566 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 FLVCR2Q9UPI3 526 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 HIVEP2P31629 2446 aa13.9□□□□□ -0.18
TSPAN4-205ENST00000397406 C17orf98A8MV24 154 aa13.9□□□□□ -0.19
TSPAN4-205ENST00000397406 FAM157AC9JC47 383 aa13.9□□□□□ -0.19
TSPAN4-205ENST00000397406 PPP1CCP36873 323 aaKnown RBP13.9□□□□□ -0.19
TSPAN4-205ENST00000397406 CEACAM6P40199 344 aa13.9□□□□□ -0.19
TSPAN4-205ENST00000397406 ERVFRD-1P60508 538 aa13.9□□□□□ -0.19
TSPAN4-205ENST00000397406 PAX2Q02962 417 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms