RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ZNF846Q147U1 533 aa19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 STEAP3Q658P3 488 aa19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 NCR3LG1Q68D85 454 aa19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 FAM53AQ6NSI3 398 aaPredicted RBP19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 OR10V1Q8NGI7 309 aa19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 OR13D1Q8NGV5 346 aa19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 TNFRSF14Q92956 283 aa19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 CABLES2Q9BTV7 478 aa19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 WDR12Q9GZL7 423 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 JPT1Q9UK76 154 aa19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 RBMX2Q9Y388 322 aaKnown RBP19.29■□□□□ 0.68
TSPAN4-203ENST00000397397 HSPA12AO43301 675 aa19.28■□□□□ 0.68
TSPAN4-203ENST00000397397 LANCL1O43813 399 aa19.28■□□□□ 0.68
TSPAN4-203ENST00000397397 GNMTQ14749 295 aa19.28■□□□□ 0.68
TSPAN4-203ENST00000397397 UTF1Q5T230 341 aa19.28■□□□□ 0.68
TSPAN4-203ENST00000397397 C1orf229Q6ZS94 237 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-203ENST00000397397 LYSMD2Q8IV50 215 aa19.28■□□□□ 0.68
TSPAN4-203ENST00000397397 PDZD9Q8IXQ8 264 aa19.28■□□□□ 0.68
TSPAN4-203ENST00000397397 PNKDQ8N490 385 aa19.28■□□□□ 0.68
TSPAN4-203ENST00000397397 OR5AP2Q8NGF4 316 aa19.28■□□□□ 0.68
TSPAN4-203ENST00000397397 LEAP2Q969E1 77 aa19.28■□□□□ 0.68
TSPAN4-203ENST00000397397 SDHCQ99643 169 aaPredicted RBP19.28■□□□□ 0.68
TSPAN4-203ENST00000397397 OR1A1Q9P1Q5 309 aa19.28■□□□□ 0.68
TSPAN4-203ENST00000397397 CSPG4Q6UVK1 2322 aa19.27■□□□□ 0.68
TSPAN4-203ENST00000397397 RNASEK-C17orf49H0YIS7 233 aa19.27■□□□□ 0.68
TSPAN4-203ENST00000397397 IGHV3-7P01780 117 aa19.27■□□□□ 0.68
TSPAN4-203ENST00000397397 CTXN2P0C2S0 81 aa19.27■□□□□ 0.68
TSPAN4-203ENST00000397397 ZBTB25P24278 435 aa19.27■□□□□ 0.68
TSPAN4-203ENST00000397397 PPP1CCP36873 323 aaKnown RBP19.27■□□□□ 0.68
TSPAN4-203ENST00000397397 TAS2R46P59540 309 aa19.27■□□□□ 0.68
TSPAN4-203ENST00000397397 CDK10Q15131 360 aa19.27■□□□□ 0.68
TSPAN4-203ENST00000397397 Q71RC1 249 aaPredicted RBP19.27■□□□□ 0.68
TSPAN4-203ENST00000397397 OR5H2Q8NGV7 314 aa19.27■□□□□ 0.68
TSPAN4-203ENST00000397397 OR10J5Q8NHC4 309 aa19.27■□□□□ 0.68
TSPAN4-203ENST00000397397 TRBV6-7A0A0A0MS04 114 aa19.26■□□□□ 0.67
TSPAN4-203ENST00000397397 PMP2P02689 132 aa19.26■□□□□ 0.67
TSPAN4-203ENST00000397397 OR3A3P47888 321 aa19.26■□□□□ 0.67
TSPAN4-203ENST00000397397 HCP5Q6MZN7 132 aa19.26■□□□□ 0.67
TSPAN4-203ENST00000397397 ABHD12Q8N2K0 398 aa19.26■□□□□ 0.67
TSPAN4-203ENST00000397397 TMEM229BQ8NBD8 167 aa19.26■□□□□ 0.67
TSPAN4-203ENST00000397397 GINS4Q9BRT9 223 aa19.26■□□□□ 0.67
TSPAN4-203ENST00000397397 CLEC7AQ9BXN2 247 aa19.26■□□□□ 0.67
TSPAN4-203ENST00000397397 NECAP2Q9NVZ3 263 aa19.26■□□□□ 0.67
TSPAN4-203ENST00000397397 A0A087X0M5 115 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 IGHV2-26A0A0B4J1V2 119 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 TRAV40A0A0B4J280 105 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 A0A1B0GX30 115 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 ZNF736B4DX44 427 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 RGS11O94810 467 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 DIRAS3O95661 229 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 CSF1P09603 554 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 CD34P28906 385 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 HRH1P35367 487 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 CEACAM6P40199 344 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 GNG10P50151 68 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 TAS2R19P59542 299 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 BAK1Q16611 211 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 MORN2Q502X0 79 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 TRIM63Q969Q1 353 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 TAS2R8Q9NYW2 309 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 ZNF107Q9UII5 783 aaPredicted RBP19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 PSG11Q9UQ72 335 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 IGHV3OR16-10A0A075B7F0 116 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 CENPVL3A0A0U1RRI6 287 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 A0A1W2PRD5 423 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 A0A1W2PRF3 423 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 A0A1W2PRM7 423 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 YPEL1O60688 119 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 CD3DP04234 171 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 PPP5CP53041 499 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 ACTBL2Q562R1 376 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 FAM120AOSQ5T036 256 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 TRIQKQ629K1 86 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 YPEL2Q96QA6 119 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 EHFQ9NZC4 300 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 ZNF69Q9UC07 566 aa19.25■□□□□ 0.67
TSPAN4-203ENST00000397397 M0QYG6 137 aa19.24■□□□□ 0.67
TSPAN4-203ENST00000397397 TOR1AO14656 332 aa19.24■□□□□ 0.67
TSPAN4-203ENST00000397397 OR5H8P0DN80 308 aa19.24■□□□□ 0.67
TSPAN4-203ENST00000397397 IGHV4-38-2P0DP08 117 aa19.24■□□□□ 0.67
TSPAN4-203ENST00000397397 CD40LGP29965 261 aa19.24■□□□□ 0.67
TSPAN4-203ENST00000397397 RFX2P48378 723 aa19.24■□□□□ 0.67
TSPAN4-203ENST00000397397 UBE2E1P51965 193 aa19.24■□□□□ 0.67
TSPAN4-203ENST00000397397 GPR157Q5UAW9 335 aa19.24■□□□□ 0.67
TSPAN4-203ENST00000397397 OR9G1Q8NH87 305 aa19.24■□□□□ 0.67
TSPAN4-203ENST00000397397 NANPQ8TBE9 248 aa19.24■□□□□ 0.67
TSPAN4-203ENST00000397397 TSC22D3Q99576 134 aa19.24■□□□□ 0.67
TSPAN4-203ENST00000397397 RDH8Q9NYR8 311 aa19.24■□□□□ 0.67
TSPAN4-203ENST00000397397 A0A1W2PPE3 182 aa19.23■□□□□ 0.67
TSPAN4-203ENST00000397397 ANKRD20A5PA0PJZ0 165 aa19.23■□□□□ 0.67
TSPAN4-203ENST00000397397 J3QRK9 145 aa19.23■□□□□ 0.67
TSPAN4-203ENST00000397397 ARG1P05089 322 aa19.23■□□□□ 0.67
TSPAN4-203ENST00000397397 INPP1P49441 399 aa19.23■□□□□ 0.67
TSPAN4-203ENST00000397397 KLF17Q5JT82 389 aaPredicted RBP19.23■□□□□ 0.67
TSPAN4-203ENST00000397397 TOMM5Q8N4H5 51 aa19.23■□□□□ 0.67
TSPAN4-203ENST00000397397 TEX29Q8N6K0 151 aa19.23■□□□□ 0.67
TSPAN4-203ENST00000397397 OR11H6Q8NGC7 330 aa19.23■□□□□ 0.67
TSPAN4-203ENST00000397397 CCDC32Q9BV29 185 aa19.23■□□□□ 0.67
TSPAN4-203ENST00000397397 IGHV1-69DA0A0B4J2H0 117 aa19.22■□□□□ 0.67
TSPAN4-203ENST00000397397 J3QR06 171 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms