RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CSTBP04080 98 aaKnown RBP11.83□□□□□ -0.52
SEC13-208ENST00000397109 ARG1P05089 322 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 EFNB2P52799 333 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 AESQ08117 197 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 LRRC75BQ2VPJ9 315 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 RSBN1Q5VWQ0 802 aaPredicted RBP11.83□□□□□ -0.52
SEC13-208ENST00000397109 GLIPR1L1Q6UWM5 242 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 DTX3Q8N9I9 347 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 GPX8Q8TED1 209 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 AJUBAQ96IF1 538 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 SSX3Q99909 188 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 URM1Q9BTM9 101 aaKnown RBP11.83□□□□□ -0.52
SEC13-208ENST00000397109 CST11Q9H112 138 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 AUNIPQ9H7T9 357 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 ING4Q9UNL4 249 aa11.83□□□□□ -0.52
SEC13-208ENST00000397109 ODAMA1E959 279 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 CLPSL1A2RUU4 121 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 ODF3BA8MYP8 253 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 HTR3BO95264 441 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 TCRBP04435 133 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 LPLP06858 475 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 VSIG8P0DPA2 414 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 BTCP35070 178 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 KCNJ3P48549 501 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 RAB25P57735 213 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 RELBQ01201 579 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 SLC22A6Q4U2R8 563 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 KRBOX4Q5JUW0 171 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 ZNF626Q68DY1 528 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 DHRS7BQ6IAN0 325 aaPredicted RBP11.82□□□□□ -0.52
SEC13-208ENST00000397109 OR52W1Q6IF63 320 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 IZUMO1Q8IYV9 350 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 OR56B4Q8NH76 319 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 C17orf50Q8WW18 174 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 TAF15Q92804 592 aaKnown RBP eCLIP11.82□□□□□ -0.52
SEC13-208ENST00000397109 MALSU1Q96EH3 234 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 NCOR1P1Q9H4R4 102 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 HRASLSQ9HDD0 168 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 OR6C3Q9NZP0 311 aa11.82□□□□□ -0.52
SEC13-208ENST00000397109 H3BUX3 64 aa11.81□□□□□ -0.52
SEC13-208ENST00000397109 RAB27BO00194 218 aa11.81□□□□□ -0.52
SEC13-208ENST00000397109 PRAF2O60831 178 aa11.81□□□□□ -0.52
SEC13-208ENST00000397109 GTF2F2P13984 249 aa11.81□□□□□ -0.52
SEC13-208ENST00000397109 GLIPR1P48060 266 aa11.81□□□□□ -0.52
SEC13-208ENST00000397109 TATDN3Q17R31 274 aa11.81□□□□□ -0.52
SEC13-208ENST00000397109 PAN3Q58A45 887 aaKnown RBP11.81□□□□□ -0.52
SEC13-208ENST00000397109 MINOS1Q5TGZ0 78 aa11.81□□□□□ -0.52
SEC13-208ENST00000397109 HEPN1Q6WQI6 88 aa11.81□□□□□ -0.52
SEC13-208ENST00000397109 LINC00596Q86U02 117 aa11.81□□□□□ -0.52
SEC13-208ENST00000397109 OSR2Q8N2R0 312 aa11.81□□□□□ -0.52
SEC13-208ENST00000397109 OR10K1Q8NGX5 313 aa11.81□□□□□ -0.52
SEC13-208ENST00000397109 CLEC7AQ9BXN2 247 aa11.81□□□□□ -0.52
SEC13-208ENST00000397109 TMEM133Q9H2Q1 129 aa11.81□□□□□ -0.52
SEC13-208ENST00000397109 RAB18Q9NP72 206 aa11.81□□□□□ -0.52
SEC13-208ENST00000397109 KLK11Q9UBX7 282 aa11.81□□□□□ -0.52
SEC13-208ENST00000397109 MINOS1-NBL1R4GNA1 71 aa11.81□□□□□ -0.52
SEC13-208ENST00000397109 GSTP1P09211 210 aaKnown RBP11.8□□□□□ -0.52
SEC13-208ENST00000397109 UNC119Q13432 240 aa11.8□□□□□ -0.52
SEC13-208ENST00000397109 PNLIPRP3Q17RR3 467 aa11.8□□□□□ -0.52
SEC13-208ENST00000397109 ZNF260Q3ZCT1 412 aa11.8□□□□□ -0.52
SEC13-208ENST00000397109 LHFPL4Q7Z7J7 247 aa11.8□□□□□ -0.52
SEC13-208ENST00000397109 RTN4RL2Q86UN3 420 aa11.8□□□□□ -0.52
SEC13-208ENST00000397109 FAM89BQ8N5H3 189 aa11.8□□□□□ -0.52
SEC13-208ENST00000397109 TMEM229BQ8NBD8 167 aa11.8□□□□□ -0.52
SEC13-208ENST00000397109 TMEM104Q8NE00 496 aa11.8□□□□□ -0.52
SEC13-208ENST00000397109 OR56B1Q8NGI3 324 aa11.8□□□□□ -0.52
SEC13-208ENST00000397109 COQ2Q96H96 371 aa11.8□□□□□ -0.52
SEC13-208ENST00000397109 IFT22Q9H7X7 185 aa11.8□□□□□ -0.52
SEC13-208ENST00000397109 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.8□□□□□ -0.52
SEC13-208ENST00000397109 ST3GAL6Q9Y274 331 aa11.8□□□□□ -0.52
SEC13-208ENST00000397109 IGHV2-26A0A0B4J1V2 119 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 TRAV24A0A0B4J272 114 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 A0A1W2PP11 408 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 C7orf66A4D0T2 115 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 FAM90A10PA6NDY2 464 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 FAM90A18PA6NE21 464 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 FAM90A16PA6NEW6 464 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 FAM90A20PA6NIJ5 464 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 FAM90A7PA6NKC0 464 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 ZNF729A6NN14 1252 aaPredicted RBP11.79□□□□□ -0.52
SEC13-208ENST00000397109 FAM90A22PA8MWA6 464 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 FAM90A12PA8MX19 464 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 FAM90A5PA8MXJ8 464 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 FAM90A23PA8MXZ1 464 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 CCNKO75909 580 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 TSPAN9O75954 239 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 FAM90A15PP0C7V4 464 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 FAM90A13PP0C7W8 464 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 FAM90A14PP0C7W9 464 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 FAM90A24PP0C7X0 464 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 AKAIN1P0CW23 69 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 MGMTP16455 207 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 SERPINA2P20848 420 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 MECP2P51608 486 aaKnown RBP11.79□□□□□ -0.52
SEC13-208ENST00000397109 RBM11P57052 281 aaKnown RBP11.79□□□□□ -0.52
SEC13-208ENST00000397109 TAS2R19P59542 299 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 PAX5Q02548 391 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 PLA2G7Q13093 441 aa11.79□□□□□ -0.52
SEC13-208ENST00000397109 ATXN7L3Q14CW9 347 aaPredicted RBP11.79□□□□□ -0.52
SEC13-208ENST00000397109 MPV17LQ2QL34 196 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms