RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 BCL2L10Q9HD36 194 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 ZNF273Q14593 569 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 TMEM52BQ4KMG9 183 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 OR10AG1Q8NH19 301 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 MRGPRFQ96AM1 343 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 PRELID3AQ96N28 172 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 DMRTA2Q96SC8 542 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 NEU1Q99519 415 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 TMEM70Q9BUB7 260 aa9.12□□□□□ -0.95
COL4A4-201ENST00000396625 EPPINO95925 133 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 HLA-DRB1P01911 266 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 HBZP02008 142 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 MT-ND6P03923 174 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 FGF9P31371 208 aaPredicted RBP9.11□□□□□ -0.95
COL4A4-201ENST00000396625 GFRA1P56159 465 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 TMEM101Q96IK0 257 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 OR2V2Q96R30 315 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 METTL26Q96S19 204 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 CBLN4Q9NTU7 201 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 SBK3P0C264 359 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 CD300CQ08708 224 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 SAMD13Q5VXD3 122 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 PDLIM7Q9NR12 457 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 OR51B2Q9Y5P1 312 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 TNCP24821 2201 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 A0A0B4J2E0 115 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 A0A1B0GX12 115 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 CXorf65A6NEN9 183 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 MKRN2OSH3BPM6 223 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 CA1P00915 261 aaPredicted RBP9.11□□□□□ -0.95
COL4A4-201ENST00000396625 HOXC4P09017 264 aaPredicted RBP9.11□□□□□ -0.95
COL4A4-201ENST00000396625 IL19Q9UHD0 177 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 ADAP1O75689 374 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 CTSDP07339 412 aaPredicted RBP9.11□□□□□ -0.95
COL4A4-201ENST00000396625 SLC23A3Q6PIS1 610 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 WFDC3Q8IUB2 231 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 MRPL30Q8TCC3 161 aaKnown RBP9.11□□□□□ -0.95
COL4A4-201ENST00000396625 FOXB1Q99853 325 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 SMOC1Q9H4F8 434 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 RECKO95980 971 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 ZNF345Q14585 488 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 PYCR3Q53H96 274 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 WDR25Q64LD2 544 aaPredicted RBP9.11□□□□□ -0.95
COL4A4-201ENST00000396625 CRYGNQ8WXF5 182 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 PGLYRP4Q96LB8 373 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 GLRX2Q9NS18 164 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 A0A1B0GU03 582 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 F12P00748 615 aaPredicted RBP9.11□□□□□ -0.95
COL4A4-201ENST00000396625 SAPCD1Q5SSQ6 148 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 CXXC4Q9H2H0 198 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 ZNF275Q9NSD4 429 aaPredicted RBP9.11□□□□□ -0.95
COL4A4-201ENST00000396625 HSPB7Q9UBY9 170 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 PLXND1Q9Y4D7 1925 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 ANKRD37Q7Z713 158 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 ATOH7Q8N100 152 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 GAPTQ8N292 157 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 OR10AC1Q8NH08 325 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 HDHD3Q9BSH5 251 aaPredicted RBP9.11□□□□□ -0.95
COL4A4-201ENST00000396625 KCNK7Q9Y2U2 307 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 DHHO43323 396 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 HYAL1Q12794 435 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 XAF1Q6GPH4 301 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 C16orf92Q96LL3 132 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 OR8B2Q96RD0 313 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 GMLQ99445 158 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 ANAPC13Q9BS18 74 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 ALKBH7Q9BT30 221 aaPredicted RBP9.11□□□□□ -0.95
COL4A4-201ENST00000396625 NTMQ9P121 344 aa9.11□□□□□ -0.95
COL4A4-201ENST00000396625 IGKV3D-11A0A0A0MRZ8 115 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 IGKV3-11P04433 115 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 TMEM78Q5T7P6 136 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 OR13C6PQ8NH95 151 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 OR51M1Q9H341 326 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 OPN4Q9UHM6 478 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 DENND4AQ7Z401 1863 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 PRR14LQ5THK1 2151 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 EML6Q6ZMW3 1958 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 TRAV38-1A0A0B4J264 116 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 ST6GAL1P15907 406 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 RAB9AP51151 201 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 SURF2Q15527 256 aaPredicted RBP9.1□□□□□ -0.95
COL4A4-201ENST00000396625 DMRTA1Q5VZB9 504 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 OR4D9Q8NGE8 314 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 HARBI1Q96MB7 349 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 TSPAN32Q96QS1 320 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 TSPAN2O60636 221 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 TNFSF15O95150 251 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 HKR1P10072 659 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 IBA57Q5T440 356 aaKnown RBP9.1□□□□□ -0.95
COL4A4-201ENST00000396625 MOGAT3Q86VF5 341 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 ABHD14BQ96IU4 210 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 C4orf45Q96LM5 186 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 C1RLQ9NZP8 487 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 IGKV6D-21A0A0A0MT36 114 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 KCNAB3O43448 404 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 CYB5R3P00387 301 aaPredicted RBP9.1□□□□□ -0.95
COL4A4-201ENST00000396625 FCGR2BP31994 310 aaPredicted RBP9.1□□□□□ -0.95
COL4A4-201ENST00000396625 EBLN2Q6P2I7 272 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 KLK15Q9H2R5 256 aa9.1□□□□□ -0.95
COL4A4-201ENST00000396625 HCFC2Q9Y5Z7 792 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms