RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 CLEC18CQ8NCF0 446 aa13.58□□□□□ -0.24
SNX6-202ENST00000396526 OR1S2Q8NGQ3 325 aa13.58□□□□□ -0.24
SNX6-202ENST00000396526 SUN5Q8TC36 379 aa13.58□□□□□ -0.24
SNX6-202ENST00000396526 GPHA2Q96T91 129 aa13.58□□□□□ -0.24
SNX6-202ENST00000396526 MSRB2Q9Y3D2 182 aa13.58□□□□□ -0.24
SNX6-202ENST00000396526 SRRM5B3KS81 715 aa13.58□□□□□ -0.24
SNX6-202ENST00000396526 C12orf77C9JDV5 145 aa13.58□□□□□ -0.24
SNX6-202ENST00000396526 ATP6V1G2-DDX39BF2Z307 99 aa13.58□□□□□ -0.24
SNX6-202ENST00000396526 PTBP3O95758 552 aaKnown RBP13.58□□□□□ -0.24
SNX6-202ENST00000396526 CD40P25942 277 aa13.58□□□□□ -0.24
SNX6-202ENST00000396526 POLR2GP62487 172 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNX6-202ENST00000396526 RPL23AP62750 156 aaKnown RBP13.58□□□□□ -0.24
SNX6-202ENST00000396526 NKX6-1P78426 367 aaPredicted RBP13.58□□□□□ -0.24
SNX6-202ENST00000396526 NMSQ5H8A3 153 aa13.58□□□□□ -0.24
SNX6-202ENST00000396526 STPG2Q8N412 459 aa13.58□□□□□ -0.24
SNX6-202ENST00000396526 MRGPRDQ8TDS7 321 aa13.58□□□□□ -0.24
SNX6-202ENST00000396526 LSM10Q969L4 123 aaKnown RBP13.58□□□□□ -0.24
SNX6-202ENST00000396526 MEGF10Q96KG7 1140 aa13.58□□□□□ -0.24
SNX6-202ENST00000396526 DMRTA2Q96SC8 542 aa13.58□□□□□ -0.24
SNX6-202ENST00000396526 NGBQ9NPG2 151 aa13.58□□□□□ -0.24
SNX6-202ENST00000396526 MED6O75586 246 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 HBZP02008 142 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 PSG2P11465 335 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 LINC00052Q96N35 136 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 SEBOXQ9HB31 216 aaPredicted RBP13.57□□□□□ -0.24
SNX6-202ENST00000396526 SH3BGRL2Q9UJC5 107 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 CACNA1DQ01668 2161 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 LGALS8O00214 317 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 SSSCA1O60232 199 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 M6PRP20645 277 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 EPHA1P21709 976 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 LRP11Q86VZ4 500 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 OR1L1Q8NH94 360 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 TMEM171Q8WVE6 324 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 SNX22Q96L94 193 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 C1QTNF9BB2RNN3 333 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 MGST3O14880 152 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 ADH4P08319 380 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 IRF2P14316 349 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 CASP6P55212 293 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 TMPRSS3P57727 454 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 IL34Q6ZMJ4 242 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 MOGAT3Q86VF5 341 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 EDARADDQ8WWZ3 215 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 ZDHHC8Q9ULC8 765 aa13.57□□□□□ -0.24
SNX6-202ENST00000396526 IGLV3-9A0A075B6K5 115 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 ZSCAN5BA6NJL1 495 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 GFRA3O60609 400 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 SEC11BP0C7V7 166 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 SULT1A2P50226 295 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 TDGF1P3P51864 188 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 ID3Q02535 119 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 EDDM3AQ14507 147 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 ZNF645Q8N7E2 425 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 BARX1Q9HBU1 254 aaPredicted RBP13.56□□□□□ -0.24
SNX6-202ENST00000396526 MMP26Q9NRE1 261 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 CADP27708 2225 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 CELSR3Q9NYQ7 3312 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 A0A0G2JNJ9 132 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 DRAM1Q8N682 238 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 DMBX1Q8NFW5 382 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 ERGIC1Q969X5 290 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 RAB40CQ96S21 281 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 MAGT1Q9H0U3 335 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 Q9UFV3 132 aa13.56□□□□□ -0.24
SNX6-202ENST00000396526 RAB5CP51148 216 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 TNFAIP6P98066 277 aaPredicted RBP13.55□□□□□ -0.24
SNX6-202ENST00000396526 EWSR1Q01844 656 aaKnown RBP eCLIP13.55□□□□□ -0.24
SNX6-202ENST00000396526 BAXQ07812 192 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 TUSC1Q2TAM9 212 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 CXorf66Q5JRM2 361 aaPredicted RBP13.55□□□□□ -0.24
SNX6-202ENST00000396526 STX12Q86Y82 276 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 TCTEX1D1Q8N7M0 179 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 APOC3P02656 99 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 MSMO1Q15800 293 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 WFDC8Q8IUA0 241 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 ITLN1Q8WWA0 313 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 COQ2Q96H96 371 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 HRH4Q9H3N8 390 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 RNF7Q9UBF6 113 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 FAM24AA6NFZ4 105 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 PRH1P02810 166 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 GLIPR1P48060 266 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 OR2D2Q9H210 308 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 LYRM2Q9NU23 88 aaPredicted RBP13.55□□□□□ -0.24
SNX6-202ENST00000396526 IL19Q9UHD0 177 aa13.55□□□□□ -0.24
SNX6-202ENST00000396526 FAM157CP0CG43 387 aa13.54□□□□□ -0.24
SNX6-202ENST00000396526 RND1Q92730 232 aa13.54□□□□□ -0.24
SNX6-202ENST00000396526 GPR146Q96CH1 333 aa13.54□□□□□ -0.24
SNX6-202ENST00000396526 LAMP3Q9UQV4 416 aa13.54□□□□□ -0.24
SNX6-202ENST00000396526 CHST1O43916 411 aa13.54□□□□□ -0.24
SNX6-202ENST00000396526 F2RL1P55085 397 aa13.54□□□□□ -0.24
SNX6-202ENST00000396526 PAX5Q02548 391 aa13.54□□□□□ -0.24
SNX6-202ENST00000396526 NHLH2Q02577 135 aa13.54□□□□□ -0.24
SNX6-202ENST00000396526 PJVKQ0ZLH3 352 aa13.54□□□□□ -0.24
SNX6-202ENST00000396526 PXDC1Q5TGL8 231 aa13.54□□□□□ -0.24
SNX6-202ENST00000396526 TMEM252Q8N6L7 170 aa13.54□□□□□ -0.24
SNX6-202ENST00000396526 SNRNP40Q96DI7 357 aaKnown RBP13.54□□□□□ -0.24
SNX6-202ENST00000396526 NARFLQ9H6Q4 476 aa13.54□□□□□ -0.24
SNX6-202ENST00000396526 GNG12Q9UBI6 72 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms