RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 SCMH1Q96GD3 660 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 ZNF714Q96N38 554 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 TTTY12Q9BZ98 90 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 OR2J1Q9GZK6 312 aa4.77□□□□□ -1.65
VPS13C-204ENST00000395898 BGLAPP02818 100 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 CD81P60033 236 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 PARP11Q9NR21 331 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 CCL21O00585 134 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 HIST1H1BP16401 226 aaKnown RBP4.76□□□□□ -1.65
VPS13C-204ENST00000395898 ERVS71-1P61550 626 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 DIDO1Q9BTC0 2240 aaKnown RBP4.76□□□□□ -1.65
VPS13C-204ENST00000395898 DOCK11Q5JSL3 2073 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 DXOO77932 396 aaKnown RBP4.76□□□□□ -1.65
VPS13C-204ENST00000395898 FAM214BQ7L5A3 538 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 TMEM191AQ9H0A3 160 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 TINAGQ9UJW2 476 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 PRR33A8MZF0 331 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 M0QZK8 103 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 HRKO00198 91 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 SMPD2O60906 423 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 GGCTO75223 188 aaKnown RBP4.76□□□□□ -1.65
VPS13C-204ENST00000395898 ARG1P05089 322 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 FAM106CPP0CH98 169 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 CXCL3P19876 107 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 PEBP1P30086 187 aaKnown RBP4.76□□□□□ -1.65
VPS13C-204ENST00000395898 MVDP53602 400 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 RBM11P57052 281 aaKnown RBP4.76□□□□□ -1.65
VPS13C-204ENST00000395898 B2MP61769 119 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 SLC23A3Q6PIS1 610 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 OR2I1PQ8NGU4 316 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 SNRNP40Q96DI7 357 aaKnown RBP4.76□□□□□ -1.65
VPS13C-204ENST00000395898 FSCN3Q9NQT6 498 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 TNS1Q9HBL0 1735 aaKnown RBP4.76□□□□□ -1.65
VPS13C-204ENST00000395898 INTS1Q8N201 2190 aaKnown RBP4.76□□□□□ -1.65
VPS13C-204ENST00000395898 HYAL3O43820 417 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-204ENST00000395898 ZNF253O75346 499 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 RD3LP0DJH9 198 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 FGF5P12034 268 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 PRDX2P32119 198 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 SLC35B1P78383 322 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 EWSR1Q01844 656 aaKnown RBP eCLIP4.76□□□□□ -1.65
VPS13C-204ENST00000395898 KCNMB1Q16558 191 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 HOGA1Q86XE5 327 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 TMEM116Q8NCL8 245 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 UCN2Q96RP3 112 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 SMOC1Q9H4F8 434 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 IFT22Q9H7X7 185 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 SRD5A3Q9H8P0 318 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 TRAV8-7A0A075B6U6 113 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 TMEM218A2RU14 115 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 ASAH2BP0C7U1 165 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 RPS4XP62701 263 aaKnown RBP4.76□□□□□ -1.65
VPS13C-204ENST00000395898 CEBPEQ15744 281 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 C1orf185Q5T7R7 199 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 ZNF343Q6P1L6 599 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 OR4A5Q8NH83 315 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 ABHD14AQ9BUJ0 271 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 A0A1W2PS18 150 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 SPINT1O43278 529 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 FAM157CP0CG43 387 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 FAM3BP58499 235 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-204ENST00000395898 RELBQ01201 579 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 SLC35E4Q6ICL7 350 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 OR5AU1Q8NGC0 362 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 PTBP3O95758 552 aaKnown RBP4.76□□□□□ -1.65
VPS13C-204ENST00000395898 CD1BP29016 333 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 TMEM50BP56557 158 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 DHRS7CA6NNS2 312 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 FOXS1O43638 330 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 MELTFP08582 738 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 G6PCP35575 357 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 PSMB2P49721 201 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 NAAAQ02083 359 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 KLF9Q13886 244 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-204ENST00000395898 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.76□□□□□ -1.65
VPS13C-204ENST00000395898 PMS2CLQ68D20 193 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 SCGB1D4Q6XE38 83 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 C16orf82Q7Z2V1 217 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 TREM2Q9NZC2 230 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 ST6GALNAC2Q9UJ37 374 aa4.76□□□□□ -1.65
VPS13C-204ENST00000395898 CTXND1A0A1B0GTU2 59 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 ZFP36L2P47974 494 aaKnown RBP4.75□□□□□ -1.65
VPS13C-204ENST00000395898 TXNDC17Q9BRA2 123 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 CCL28Q9NRJ3 127 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 VSIG4Q9Y279 399 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 OR51B2Q9Y5P1 312 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 CDRT15L2A8MXV6 281 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 TSPAN2O60636 221 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 DLK1P80370 383 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 ADAD2Q8NCV1 583 aaKnown RBP4.75□□□□□ -1.65
VPS13C-204ENST00000395898 ADAT3Q96EY9 351 aaPredicted RBP4.75□□□□□ -1.65
VPS13C-204ENST00000395898 SDK2Q58EX2 2172 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 TRAV20A0A0B4J274 112 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 H0Y980 276 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 SRSF10O75494 262 aaKnown RBP4.75□□□□□ -1.65
VPS13C-204ENST00000395898 CFDP00746 253 aaPredicted RBP4.75□□□□□ -1.65
VPS13C-204ENST00000395898 IGHV4-34P06331 123 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 HOXA6P31267 233 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 SULT1A2P50226 295 aa4.75□□□□□ -1.65
VPS13C-204ENST00000395898 SELENOTP62341 195 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms