RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 HMGN3Q15651 99 aa9.43□□□□□ -0.9
RTN1-203ENST00000395090 IGSF11Q5DX21 431 aa9.43□□□□□ -0.9
RTN1-203ENST00000395090 AADACL3Q5VUY0 350 aa9.43□□□□□ -0.9
RTN1-203ENST00000395090 SLC36A1Q7Z2H8 476 aa9.43□□□□□ -0.9
RTN1-203ENST00000395090 PEG10Q86TG7 708 aaKnown RBP9.43□□□□□ -0.9
RTN1-203ENST00000395090 CCDC107Q8WV48 283 aa9.43□□□□□ -0.9
RTN1-203ENST00000395090 GPHA2Q96T91 129 aa9.43□□□□□ -0.9
RTN1-203ENST00000395090 GINS4Q9BRT9 223 aa9.43□□□□□ -0.9
RTN1-203ENST00000395090 ALX4Q9H161 411 aaPredicted RBP9.43□□□□□ -0.9
RTN1-203ENST00000395090 C20orf85Q9H1P6 137 aa9.43□□□□□ -0.9
RTN1-203ENST00000395090 LIME1Q9H400 295 aa9.43□□□□□ -0.9
RTN1-203ENST00000395090 CHODLQ9H9P2 273 aa9.43□□□□□ -0.9
RTN1-203ENST00000395090 PAIP2BQ9ULR5 123 aaKnown RBP9.43□□□□□ -0.9
RTN1-203ENST00000395090 TRAV6A0A075B6T7 132 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 MEIKINA0A087WXM9 373 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 TRBV6-7A0A0A0MS04 114 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 A0A0B4J293 547 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 A0A1B0GW55 424 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 ODAMA1E959 279 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 NKX6-3A6NJ46 265 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 NPIPB11E5RHQ5 1161 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 PEX14O75381 377 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 FCN3O75636 299 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 DUX4L2P0CJ85 424 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 DUX4L3P0CJ86 424 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 DUX4L4P0CJ87 422 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 DUX4L5P0CJ88 424 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 DUX4L6P0CJ89 424 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 DUX4L7P0CJ90 424 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 CGB3P0DN86 165 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 CGB7P0DN87 165 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 SELLP14151 372 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 HLA-DRB3P79483 266 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 SCGB2B2Q4G0G5 96 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 TRAT1Q6PIZ9 186 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 DUX4L9Q6RFH8 374 aaPredicted RBP9.42□□□□□ -0.9
RTN1-203ENST00000395090 LYPD2Q6UXB3 125 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 C5orf24Q7Z6I8 188 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 FAM216BQ8N7L0 139 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 ZDHHC22Q8N966 263 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 ZNF565Q8N9K5 539 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 CORO2AQ92828 525 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 NEIL1Q96FI4 390 aaPredicted RBP9.42□□□□□ -0.9
RTN1-203ENST00000395090 CABLES2Q9BTV7 478 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 TAF9BQ9HBM6 251 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 DUX4Q9UBX2 424 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 GPR132Q9UNW8 380 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 FLVCR2Q9UPI3 526 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 AKAP6Q13023 2319 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 TRAV39A0A0B4J263 110 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 C12orf77C9JDV5 145 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 NDUFS7O75251 213 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 TUSC2O75896 110 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 DHFRP00374 187 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 HEXAP06865 529 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 SEC61A1P61619 476 aaKnown RBP9.42□□□□□ -0.9
RTN1-203ENST00000395090 SURF2Q15527 256 aaPredicted RBP9.42□□□□□ -0.9
RTN1-203ENST00000395090 TATDN3Q17R31 274 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 TMEM155Q4W5P6 130 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 C6orf183Q5T699 404 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 MUC20Q8N307 709 aaPredicted RBP9.42□□□□□ -0.9
RTN1-203ENST00000395090 ZBTB34Q8NCN2 500 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 TMEM185AQ8NFB2 350 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 OR13A1Q8NGR1 328 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 RAB1CQ92928 201 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 TIMD4Q96H15 378 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 TOLLIPQ9H0E2 274 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 LINC00574Q9H8X3 128 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 KCNIP1Q9NZI2 227 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 OR6C3Q9NZP0 311 aa9.42□□□□□ -0.9
RTN1-203ENST00000395090 C7orf66A4D0T2 115 aa9.41□□□□□ -0.9
RTN1-203ENST00000395090 OR5H14A6NHG9 310 aa9.41□□□□□ -0.9
RTN1-203ENST00000395090 C15orf65H3BRN8 121 aa9.41□□□□□ -0.9
RTN1-203ENST00000395090 ARPC1BO15143 372 aaKnown RBP9.41□□□□□ -0.9
RTN1-203ENST00000395090 ADAM20O43506 726 aa9.41□□□□□ -0.9
RTN1-203ENST00000395090 IL5P05113 134 aa9.41□□□□□ -0.9
RTN1-203ENST00000395090 PAX1P15863 534 aa9.41□□□□□ -0.9
RTN1-203ENST00000395090 FCGR2CP31995 323 aa9.41□□□□□ -0.9
RTN1-203ENST00000395090 UCP3P55916 312 aa9.41□□□□□ -0.9
RTN1-203ENST00000395090 RAB25P57735 213 aa9.41□□□□□ -0.9
RTN1-203ENST00000395090 MEF2CQ06413 473 aaPredicted RBP9.41□□□□□ -0.9
RTN1-203ENST00000395090 ZNF841Q6ZN19 808 aa9.41□□□□□ -0.9
RTN1-203ENST00000395090 AKAP14Q86UN6 197 aa9.41□□□□□ -0.9
RTN1-203ENST00000395090 TPRX1Q8N7U7 411 aa9.41□□□□□ -0.9
RTN1-203ENST00000395090 MRGPRDQ8TDS7 321 aa9.41□□□□□ -0.9
RTN1-203ENST00000395090 ZNF2Q9BSG1 426 aaPredicted RBP9.41□□□□□ -0.9
RTN1-203ENST00000395090 CTSZQ9UBR2 303 aa9.41□□□□□ -0.9
RTN1-203ENST00000395090 SLC25A10Q9UBX3 287 aaPredicted RBP9.41□□□□□ -0.9
RTN1-203ENST00000395090 VSIG4Q9Y279 399 aa9.41□□□□□ -0.9
RTN1-203ENST00000395090 DVL1O14640 695 aa9.4□□□□□ -0.9
RTN1-203ENST00000395090 NDUFB3O43676 98 aa9.4□□□□□ -0.9
RTN1-203ENST00000395090 PRAF2O60831 178 aa9.4□□□□□ -0.9
RTN1-203ENST00000395090 WNT2P09544 360 aa9.4□□□□□ -0.9
RTN1-203ENST00000395090 GLP1RP43220 463 aa9.4□□□□□ -0.9
RTN1-203ENST00000395090 HTD2P86397 168 aa9.4□□□□□ -0.9
RTN1-203ENST00000395090 EDDM3AQ14507 147 aa9.4□□□□□ -0.9
RTN1-203ENST00000395090 LRRC10Q5BKY1 277 aa9.4□□□□□ -0.9
RTN1-203ENST00000395090 H1FOOQ8IZA3 346 aaPredicted RBP9.4□□□□□ -0.9
RTN1-203ENST00000395090 OR10J5Q8NHC4 309 aa9.4□□□□□ -0.9
RTN1-203ENST00000395090 MARCH1Q8TCQ1 289 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms