RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 JOSD1Q15040 202 aaPredicted RBP12.22□□□□□ -0.45
CLIP2-203ENST00000395060 TMEM211Q6ICI0 200 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 FAM185AQ8N0U4 392 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 FOXB1Q99853 325 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 WNT5BQ9H1J7 359 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 OCIAD1Q9NX40 245 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 RARRES3Q9UL19 164 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 RNF150Q9ULK6 438 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 GPR179Q6PRD1 2367 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 A6NNC1 897 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 MDH2P40926 338 aaKnown RBP12.22□□□□□ -0.45
CLIP2-203ENST00000395060 CXCL12P48061 93 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 CPEB3Q8NE35 698 aaKnown RBP12.22□□□□□ -0.45
CLIP2-203ENST00000395060 OR13D1Q8NGV5 346 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 OR5B12Q96R08 314 aa12.22□□□□□ -0.45
CLIP2-203ENST00000395060 hCG_38984A0A1B0GV85 526 aa12.21□□□□□ -0.45
CLIP2-203ENST00000395060 CLDN1O95832 211 aa12.21□□□□□ -0.45
CLIP2-203ENST00000395060 OPN1MWP04001 364 aa12.21□□□□□ -0.45
CLIP2-203ENST00000395060 OPN1MW2P0DN77 364 aa12.21□□□□□ -0.45
CLIP2-203ENST00000395060 OPN1MW3P0DN78 364 aa12.21□□□□□ -0.45
CLIP2-203ENST00000395060 RPL29P47914 159 aaKnown RBP12.21□□□□□ -0.45
CLIP2-203ENST00000395060 HOXA4Q00056 320 aaPredicted RBP12.21□□□□□ -0.45
CLIP2-203ENST00000395060 BSXQ3C1V8 233 aa12.21□□□□□ -0.45
CLIP2-203ENST00000395060 HAPLN4Q86UW8 402 aa12.21□□□□□ -0.45
CLIP2-203ENST00000395060 H1FOOQ8IZA3 346 aaPredicted RBP12.21□□□□□ -0.45
CLIP2-203ENST00000395060 SNIP1Q8TAD8 396 aaKnown RBP12.21□□□□□ -0.45
CLIP2-203ENST00000395060 USF3Q68DE3 2245 aa12.21□□□□□ -0.45
CLIP2-203ENST00000395060 C5orf49A4QMS7 147 aa12.21□□□□□ -0.46
CLIP2-203ENST00000395060 DFFBO76075 338 aa12.21□□□□□ -0.46
CLIP2-203ENST00000395060 COL8A2P25067 703 aa12.21□□□□□ -0.46
CLIP2-203ENST00000395060 F2RP25116 425 aa12.21□□□□□ -0.46
CLIP2-203ENST00000395060 OR2V1Q8NHB1 315 aa12.21□□□□□ -0.46
CLIP2-203ENST00000395060 FGF23Q9GZV9 251 aaPredicted RBP12.21□□□□□ -0.46
CLIP2-203ENST00000395060 TMEM38BQ9NVV0 291 aa12.21□□□□□ -0.46
CLIP2-203ENST00000395060 MTCH1Q9NZJ7 389 aa12.21□□□□□ -0.46
CLIP2-203ENST00000395060 ZNF705FA8MVS1 300 aaPredicted RBP12.2□□□□□ -0.46
CLIP2-203ENST00000395060 C1QTNF9BB2RNN3 333 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 ETV2O00321 342 aaPredicted RBP12.2□□□□□ -0.46
CLIP2-203ENST00000395060 RBMXL2O75526 392 aaKnown RBP12.2□□□□□ -0.46
CLIP2-203ENST00000395060 ZNF705DP0CH99 300 aaPredicted RBP12.2□□□□□ -0.46
CLIP2-203ENST00000395060 ZNF705BP0CI00 300 aaPredicted RBP12.2□□□□□ -0.46
CLIP2-203ENST00000395060 UCP1P25874 307 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 FOXG1P55316 489 aaPredicted RBP12.2□□□□□ -0.46
CLIP2-203ENST00000395060 CARD18P57730 90 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 CD81P60033 236 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 BAXQ07812 192 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 PRDX4Q13162 271 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 TMEM241Q24JQ0 296 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 TEX38Q6PEX7 206 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 OR51G1Q8NGK1 321 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 OR2H1Q9GZK4 316 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 CISD1Q9NZ45 108 aaKnown RBP12.2□□□□□ -0.46
CLIP2-203ENST00000395060 PTRH2Q9Y3E5 179 aaKnown RBP12.2□□□□□ -0.46
CLIP2-203ENST00000395060 SYNGR2O43760 224 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 PAX5Q02548 391 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 WIPI1Q5MNZ9 446 aaPredicted RBP12.2□□□□□ -0.46
CLIP2-203ENST00000395060 SPATA46Q5T0L3 261 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 RPP25LQ8N5L8 163 aaKnown RBP12.2□□□□□ -0.46
CLIP2-203ENST00000395060 FADS6Q8N9I5 356 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 VAX2Q9UIW0 290 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 GTF3C1Q12789 2109 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 LILRA1O75019 489 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 NGFP01138 241 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 RFPL3SP0C7P2 107 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 CCL7P80098 99 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 SLC10A1Q14973 349 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 SPEM1Q8N4L4 309 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 ZNF525Q8N782 197 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 OR10J5Q8NHC4 309 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 PARLQ9H300 379 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 IL17BQ9UHF5 180 aa12.2□□□□□ -0.46
CLIP2-203ENST00000395060 ZNF25P17030 456 aaPredicted RBP12.19□□□□□ -0.46
CLIP2-203ENST00000395060 RPL23P62829 140 aaKnown RBP12.19□□□□□ -0.46
CLIP2-203ENST00000395060 HIST1H3AP68431 136 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 BTNL3Q6UXE8 466 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 ZNF705AQ6ZN79 300 aaPredicted RBP12.19□□□□□ -0.46
CLIP2-203ENST00000395060 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.19□□□□□ -0.46
CLIP2-203ENST00000395060 TMEM256Q8N2U0 113 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 MRPL30Q8TCC3 161 aaKnown RBP12.19□□□□□ -0.46
CLIP2-203ENST00000395060 IL22RA2Q969J5 263 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 ADGRG7Q96K78 797 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 SNHG12Q9BXW3 62 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 ZNF552Q9H707 407 aaPredicted RBP12.19□□□□□ -0.46
CLIP2-203ENST00000395060 PRDM6Q9NQX0 595 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 KNTC1P50748 2209 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 EXPH5Q8NEV8 1989 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 A0A1W2PQM1 296 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 GRIFINA4D1Z8 144 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 B4DEV8 164 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 KRASP01116 189 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 IGKV1-39P01597 117 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 IGKV1D-39P04432 117 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 LIFP15018 202 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 SELEP16581 610 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 RND2P52198 227 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 NUBP1P53384 320 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 PSMF1Q92530 271 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 SDSLQ96GA7 329 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 NDUFAF3Q9BU61 184 aa12.19□□□□□ -0.46
CLIP2-203ENST00000395060 CHRNA10Q9GZZ6 450 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms