RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 IZUMO1Q8IYV9 350 aa6.97□□□□□ -1.29
ATG4A-205ENST00000394892 OR10X1Q8NGY0 326 aa6.97□□□□□ -1.29
ATG4A-205ENST00000394892 NEK7Q8TDX7 302 aa6.97□□□□□ -1.29
ATG4A-205ENST00000394892 TMEM203Q969S6 136 aa6.97□□□□□ -1.29
ATG4A-205ENST00000394892 AKR1E2Q96JD6 320 aa6.97□□□□□ -1.29
ATG4A-205ENST00000394892 S100A13Q99584 98 aa6.97□□□□□ -1.29
ATG4A-205ENST00000394892 HSPB9Q9BQS6 159 aa6.97□□□□□ -1.29
ATG4A-205ENST00000394892 UQCC2Q9BRT2 126 aa6.97□□□□□ -1.29
ATG4A-205ENST00000394892 NICN1Q9BSH3 213 aa6.97□□□□□ -1.29
ATG4A-205ENST00000394892 FAAP24Q9BTP7 215 aa6.97□□□□□ -1.29
ATG4A-205ENST00000394892 DCLRE1BQ9H816 532 aa6.97□□□□□ -1.29
ATG4A-205ENST00000394892 TAF9BQ9HBM6 251 aa6.97□□□□□ -1.29
ATG4A-205ENST00000394892 PCDHB16Q9NRJ7 776 aa6.97□□□□□ -1.29
ATG4A-205ENST00000394892 CKLFQ9UBR5 152 aa6.97□□□□□ -1.29
ATG4A-205ENST00000394892 ERGIC3Q9Y282 383 aa6.97□□□□□ -1.29
ATG4A-205ENST00000394892 TSSC4Q9Y5U2 329 aaPredicted RBP6.97□□□□□ -1.29
ATG4A-205ENST00000394892 SHISA3A0PJX4 238 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 M0QZK8 103 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 GAPDHP04406 335 aaKnown RBP6.96□□□□□ -1.3
ATG4A-205ENST00000394892 GLAP06280 429 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 PF4V1P10720 104 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 MYF6P23409 242 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 CD1BP29016 333 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 PPP1CCP36873 323 aaKnown RBP6.96□□□□□ -1.3
ATG4A-205ENST00000394892 MAP2K4P45985 399 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 GPR12P47775 334 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 TMEM50BP56557 158 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 RPS27AP62979 156 aaKnown RBP6.96□□□□□ -1.3
ATG4A-205ENST00000394892 CFHR3Q02985 330 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 TPBGQ13641 420 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 GPR176Q14439 515 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 HES1Q14469 280 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 Q3ZCU0 254 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 MORN2Q502X0 79 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 LIPKQ5VXJ0 399 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 ZNF880Q6PDB4 577 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 OR2W3Q7Z3T1 314 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 C6orf201Q7Z4U5 140 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 CEACAM19Q7Z692 300 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 LINC00482Q8N8I6 264 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 PHYHIPQ92561 330 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 HDHD3Q9BSH5 251 aaPredicted RBP6.96□□□□□ -1.3
ATG4A-205ENST00000394892 MND1Q9BWT6 205 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 TM2D1Q9BX74 207 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 SPACA1Q9HBV2 294 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 TRAPPC2LQ9UL33 140 aa6.96□□□□□ -1.3
ATG4A-205ENST00000394892 PLXNB1O43157 2135 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 PSMB11A5LHX3 300 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 K7EIL1 84 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 SOCS1O15524 211 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 PROP1O75360 226 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 DUS4LO95620 317 aaKnown RBP6.95□□□□□ -1.3
ATG4A-205ENST00000394892 NAPSAO96009 420 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 SRMP19623 302 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 CRHBPP24387 322 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 CNTFRP26992 372 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 OR3A3P47888 321 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 ARHGDIBP52566 201 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 RPL23AP62750 156 aaKnown RBP6.95□□□□□ -1.3
ATG4A-205ENST00000394892 DCTN2Q13561 401 aaKnown RBP6.95□□□□□ -1.3
ATG4A-205ENST00000394892 GPR50Q13585 617 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 HMGN3Q15651 99 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 NKAPLQ5M9Q1 402 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 TGIF2LXQ8IUE1 241 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 MRPL41Q8IXM3 137 aaKnown RBP6.95□□□□□ -1.3
ATG4A-205ENST00000394892 STPG2Q8N412 459 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 PRR18Q8N4B5 295 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 FAM71E2Q8N5Q1 922 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 MS4A15Q8N5U1 240 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 NKAIN3Q8N8D7 197 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 DUX3Q96PT4 197 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 S1PR3Q99500 378 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 ZNF251Q9BRH9 671 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 MRPL20Q9BYC9 149 aaKnown RBP6.95□□□□□ -1.3
ATG4A-205ENST00000394892 ANKRD60Q9BZ19 345 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 LPAR5Q9H1C0 372 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 ABCG5Q9H222 651 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 IFI27L2Q9H2X8 130 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 GNG12Q9UBI6 72 aa6.95□□□□□ -1.3
ATG4A-205ENST00000394892 NBEAL2Q6ZNJ1 2754 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 WI2-2373I1.2A0A1W2PRP0 233 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 SERPINE3A8MV23 424 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 LDLRAD4O15165 306 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 SPINT2O43291 252 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 LANCL1O43813 399 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 CA11O75493 328 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 MOSP00540 346 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 PF4P02776 101 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 RPLP1P05386 114 aaKnown RBP6.94□□□□□ -1.3
ATG4A-205ENST00000394892 MAPK3P27361 379 aaPredicted RBP6.94□□□□□ -1.3
ATG4A-205ENST00000394892 THBS3P49746 956 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 CLDN12P56749 244 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 LINC00205P59089 165 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 FABP5Q01469 135 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 CD69Q07108 199 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 LSAMPQ13449 338 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 KIAA0141Q14154 515 aaPredicted RBP6.94□□□□□ -1.3
ATG4A-205ENST00000394892 P2RY14Q15391 338 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 MED22Q15528 200 aa6.94□□□□□ -1.3
ATG4A-205ENST00000394892 SSX1Q16384 188 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms