RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 C1QL4Q86Z23 238 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 OSR2Q8N2R0 312 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 MSI2Q96DH6 328 aaKnown RBP13.29□□□□□ -0.28
PTBP1-204ENST00000394601 HS3ST6Q96QI5 342 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 ELOA3CA0A087WX78 387 aaPredicted RBP13.29□□□□□ -0.28
PTBP1-204ENST00000394601 C9orf172C9J069 976 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 HSPB6O14558 160 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 SELEP16581 610 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 NPBWR2P48146 333 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 FUT6P51993 359 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 FOXG1P55316 489 aaPredicted RBP13.29□□□□□ -0.28
PTBP1-204ENST00000394601 RPS16P62249 146 aaKnown RBP13.29□□□□□ -0.28
PTBP1-204ENST00000394601 NRN1LQ496H8 165 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 C6orf15Q6UXA7 325 aaPredicted RBP13.29□□□□□ -0.28
PTBP1-204ENST00000394601 IL22RA1Q8N6P7 574 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 LYPD6BQ8NI32 183 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 BORCS8Q96FH0 119 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 SIGLEC12Q96PQ1 595 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 PCGF1Q9BSM1 259 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 NECAP2Q9NVZ3 263 aa13.29□□□□□ -0.28
PTBP1-204ENST00000394601 ZNHIT1O43257 154 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 GLIPR1P48060 266 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 CLDN18P56856 261 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 EWSR1Q01844 656 aaKnown RBP eCLIP13.28□□□□□ -0.284e-8■■■□□ 18.8
PTBP1-204ENST00000394601 ZNF154Q13106 437 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 TOMM20LQ6UXN7 152 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 Q6ZVH6 145 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 ZNF703Q9H7S9 590 aaPredicted RBP13.28□□□□□ -0.28
PTBP1-204ENST00000394601 ST3GAL6Q9Y274 331 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 CEACAM1P13688 526 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 CYB561P49447 251 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 RBM11P57052 281 aaKnown RBP13.28□□□□□ -0.28
PTBP1-204ENST00000394601 HES7Q9BYE0 225 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 PRRG4Q9BZD6 226 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 ARV1Q9H2C2 271 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 NAA60Q9H7X0 242 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 PITPNC1Q9UKF7 332 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 SIAH2O43255 324 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 IL18BPO95998 194 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 HNF1AP20823 631 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 OR1P1Q8NH06 330 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 PATZ1Q9HBE1 687 aaKnown RBP13.28□□□□□ -0.28
PTBP1-204ENST00000394601 RNF24Q9Y225 148 aa13.28□□□□□ -0.28
PTBP1-204ENST00000394601 PPP5D1E7EU14 171 aa13.27□□□□□ -0.28
PTBP1-204ENST00000394601 IGHV3-9P01782 118 aa13.27□□□□□ -0.28
PTBP1-204ENST00000394601 IRF2P14316 349 aa13.27□□□□□ -0.28
PTBP1-204ENST00000394601 OR3A1P47881 315 aa13.27□□□□□ -0.28
PTBP1-204ENST00000394601 HIKESHIQ53FT3 197 aa13.27□□□□□ -0.28
PTBP1-204ENST00000394601 CXorf66Q5JRM2 361 aaPredicted RBP13.27□□□□□ -0.28
PTBP1-204ENST00000394601 RSG1Q9BU20 258 aa13.27□□□□□ -0.28
PTBP1-204ENST00000394601 PLEKHA2Q9HB19 425 aa13.27□□□□□ -0.28
PTBP1-204ENST00000394601 SLC7A10Q9NS82 523 aa13.27□□□□□ -0.28
PTBP1-204ENST00000394601 SVILO95425 2214 aa13.27□□□□□ -0.29
PTBP1-204ENST00000394601 ZNF816-ZNF321PA0A0X1KG74 233 aa13.27□□□□□ -0.29
PTBP1-204ENST00000394601 RPL36A-HNRNPH2H7BZ11 118 aa13.27□□□□□ -0.29
PTBP1-204ENST00000394601 GAPDHP04406 335 aaKnown RBP13.27□□□□□ -0.29
PTBP1-204ENST00000394601 ZNF728P0DKX0 622 aa13.27□□□□□ -0.29
PTBP1-204ENST00000394601 GDF1P27539 372 aa13.27□□□□□ -0.29
PTBP1-204ENST00000394601 GNRHRP30968 328 aa13.27□□□□□ -0.29
PTBP1-204ENST00000394601 FAM3BP58499 235 aaPredicted RBP13.27□□□□□ -0.29
PTBP1-204ENST00000394601 GNB2P62879 340 aa13.27□□□□□ -0.29
PTBP1-204ENST00000394601 TDRG1Q3Y452 100 aa13.27□□□□□ -0.29
PTBP1-204ENST00000394601 MOB3AQ96BX8 217 aa13.27□□□□□ -0.29
PTBP1-204ENST00000394601 REPIN1Q9BWE0 567 aaKnown RBP13.27□□□□□ -0.29
PTBP1-204ENST00000394601 C11orf1Q9H5F2 150 aa13.27□□□□□ -0.29
PTBP1-204ENST00000394601 SLC2A9Q9NRM0 540 aa13.27□□□□□ -0.29
PTBP1-204ENST00000394601 FOXJ2Q9P0K8 574 aa13.27□□□□□ -0.29
PTBP1-204ENST00000394601 HSPA12AO43301 675 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 DYNLT3P51808 116 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 RAB4BP61018 213 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 ICAM4Q14773 271 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 TBX15Q96SF7 602 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 LINC00470Q9BZP3 86 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 UBE2J1Q9Y385 318 aaPredicted RBP13.26□□□□□ -0.29
PTBP1-204ENST00000394601 ZNF318Q5VUA4 2279 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 DLEU1O43261 78 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 PDCD6O75340 191 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 LMO1P25800 156 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 PCBD1P61457 104 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 OR2M7Q8NG81 312 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 OR10A7Q8NGE5 316 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 NKX2-6A6NCS4 301 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 CHRNA7P36544 502 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 TMEM267Q0VDI3 215 aaPredicted RBP13.26□□□□□ -0.29
PTBP1-204ENST00000394601 OR2C3Q8N628 320 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 RAB24Q969Q5 203 aa13.26□□□□□ -0.29
PTBP1-204ENST00000394601 MED13Q9UHV7 2174 aa13.25□□□□□ -0.29
PTBP1-204ENST00000394601 LPAL2Q16609 132 aa13.25□□□□□ -0.29
PTBP1-204ENST00000394601 ZNF611Q8N823 705 aa13.25□□□□□ -0.29
PTBP1-204ENST00000394601 PIGCQ92535 297 aa13.25□□□□□ -0.29
PTBP1-204ENST00000394601 STRAPQ9Y3F4 350 aaKnown RBP13.25□□□□□ -0.29
PTBP1-204ENST00000394601 GRIFINA4D1Z8 144 aa13.25□□□□□ -0.29
PTBP1-204ENST00000394601 CBY3A6NI87 242 aa13.25□□□□□ -0.29
PTBP1-204ENST00000394601 PLCXD3Q63HM9 321 aa13.25□□□□□ -0.29
PTBP1-204ENST00000394601 TMEM211Q6ICI0 200 aa13.25□□□□□ -0.29
PTBP1-204ENST00000394601 Q6ZS49 121 aa13.25□□□□□ -0.29
PTBP1-204ENST00000394601 TMEM183AQ8IXX5 376 aa13.25□□□□□ -0.29
PTBP1-204ENST00000394601 LFNGQ8NES3 379 aa13.25□□□□□ -0.29
PTBP1-204ENST00000394601 TMEM171Q8WVE6 324 aa13.25□□□□□ -0.29
PTBP1-204ENST00000394601 SMIM7Q9BQ49 75 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms