RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 PRRC2CQ9Y520 2896 aaKnown RBP13.79□□□□□ -0.2
PDZD4-202ENST00000393758 FFAR4Q5NUL3 377 aa13.79□□□□□ -0.2
PDZD4-202ENST00000393758 FAM58AQ8N1B3 248 aa13.79□□□□□ -0.2
PDZD4-202ENST00000393758 ZIC4Q8N9L1 334 aa13.79□□□□□ -0.2
PDZD4-202ENST00000393758 RCC1LQ96I51 464 aaKnown RBP13.79□□□□□ -0.2
PDZD4-202ENST00000393758 PITPNC1Q9UKF7 332 aa13.79□□□□□ -0.2
PDZD4-202ENST00000393758 LOC102723971A0A1B0GUV8 181 aa13.79□□□□□ -0.2
PDZD4-202ENST00000393758 DEFA4P12838 97 aa13.79□□□□□ -0.2
PDZD4-202ENST00000393758 HIST1H1BP16401 226 aaKnown RBP13.79□□□□□ -0.2
PDZD4-202ENST00000393758 PNRC1Q12796 327 aaPredicted RBP13.79□□□□□ -0.2
PDZD4-202ENST00000393758 FAM78BQ5VT40 261 aa13.79□□□□□ -0.2
PDZD4-202ENST00000393758 KCNIP4Q6PIL6 250 aa13.79□□□□□ -0.2
PDZD4-202ENST00000393758 H1FOOQ8IZA3 346 aaPredicted RBP13.79□□□□□ -0.2
PDZD4-202ENST00000393758 ATG101Q9BSB4 218 aa13.79□□□□□ -0.2
PDZD4-202ENST00000393758 OR2W1Q9Y3N9 320 aa13.79□□□□□ -0.2
PDZD4-202ENST00000393758 IGLV3-19P01714 112 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 GABRA2P47869 451 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 RPL29P47914 159 aaKnown RBP13.78□□□□□ -0.2
PDZD4-202ENST00000393758 SLC25A53Q5H9E4 307 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 ABHD17BQ5VST6 288 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 HIST3H2BBQ8N257 126 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 OBP2BQ9NPH6 170 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 CLN8Q9UBY8 286 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 PTPRSQ13332 1948 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 hCG_38984A0A1B0GV85 526 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 DEFB108AA8MXU0 73 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 PAGE4O60829 102 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 CTSSP25774 331 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 UCP3P55916 312 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 MSMO1Q15800 293 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 BTNL3Q6UXE8 466 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 TUSC5Q8IXB3 177 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 MRPL30Q8TCC3 161 aaKnown RBP13.78□□□□□ -0.2
PDZD4-202ENST00000393758 TMEM18Q96B42 140 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 NDUFB7P17568 137 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 C17orf82Q86X59 251 aaPredicted RBP13.78□□□□□ -0.2
PDZD4-202ENST00000393758 OR10P1Q8NGE3 313 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 OR10G4Q8NGN3 311 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 OR10G9Q8NGN4 311 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 OR10G7Q8NGN6 311 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 M1APQ8TC57 530 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 APH1AQ96BI3 265 aa13.78□□□□□ -0.2
PDZD4-202ENST00000393758 EDDM3BP56851 147 aa13.77□□□□□ -0.2
PDZD4-202ENST00000393758 PCOLCEQ15113 449 aa13.77□□□□□ -0.2
PDZD4-202ENST00000393758 OR8B8Q15620 311 aa13.77□□□□□ -0.2
PDZD4-202ENST00000393758 MSL2Q9HCI7 577 aa13.77□□□□□ -0.2
PDZD4-202ENST00000393758 CNOT1A5YKK6 2376 aaKnown RBP13.77□□□□□ -0.2
PDZD4-202ENST00000393758 FOSL1P15407 271 aa13.77□□□□□ -0.21
PDZD4-202ENST00000393758 EDDM3AQ14507 147 aa13.77□□□□□ -0.21
PDZD4-202ENST00000393758 HIST3H3Q16695 136 aa13.77□□□□□ -0.21
PDZD4-202ENST00000393758 IL22RA2Q969J5 263 aa13.77□□□□□ -0.21
PDZD4-202ENST00000393758 SAMD10Q9BYL1 202 aa13.77□□□□□ -0.21
PDZD4-202ENST00000393758 ZNF552Q9H707 407 aaPredicted RBP13.77□□□□□ -0.21
PDZD4-202ENST00000393758 NAT8Q9UHE5 227 aa13.77□□□□□ -0.21
PDZD4-202ENST00000393758 IGHV3-43A0A0B4J1X8 118 aa13.77□□□□□ -0.21
PDZD4-202ENST00000393758 A0A0G2JRQ6 117 aa13.77□□□□□ -0.21
PDZD4-202ENST00000393758 ARGFXA6NJG6 315 aa13.77□□□□□ -0.21
PDZD4-202ENST00000393758 IGHV3-43DP0DP04 118 aa13.77□□□□□ -0.21
PDZD4-202ENST00000393758 G6PCP35575 357 aa13.77□□□□□ -0.21
PDZD4-202ENST00000393758 MRGPRGQ86SM5 289 aa13.77□□□□□ -0.21
PDZD4-202ENST00000393758 LRTM2Q8N967 370 aa13.77□□□□□ -0.21
PDZD4-202ENST00000393758 KDF1Q8NAX2 398 aaPredicted RBP13.77□□□□□ -0.21
PDZD4-202ENST00000393758 CPEB3Q8NE35 698 aaKnown RBP13.77□□□□□ -0.21
PDZD4-202ENST00000393758 PHF7Q9BWX1 381 aaPredicted RBP13.77□□□□□ -0.21
PDZD4-202ENST00000393758 B4GALT7Q9UBV7 327 aa13.77□□□□□ -0.21
PDZD4-202ENST00000393758 B4DEV8 164 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 TCAPO15273 167 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 CD55P08174 381 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 SNRPCP09234 159 aaKnown RBP13.76□□□□□ -0.21
PDZD4-202ENST00000393758 FOXO1Q12778 655 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 PDLIM3Q53GG5 364 aaPredicted RBP13.76□□□□□ -0.21
PDZD4-202ENST00000393758 LYPD6BQ8NI32 183 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 ABHD5Q8WTS1 349 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 LRRC3CA6NJW4 275 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 SPINK4O60575 86 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 COL10A1Q03692 680 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 ZNF573Q86YE8 665 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 FADS6Q8N9I5 356 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 APOBEC3DQ96AK3 386 aaPredicted RBP13.76□□□□□ -0.21
PDZD4-202ENST00000393758 LIN7CQ9NUP9 197 aaKnown RBP13.76□□□□□ -0.21
PDZD4-202ENST00000393758 MTCH1Q9NZJ7 389 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 ATP23Q9Y6H3 246 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 FOXI3A8MTJ6 420 aaPredicted RBP13.76□□□□□ -0.21
PDZD4-202ENST00000393758 SELEP16581 610 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 FGF12P61328 243 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 OR2T10Q8NGZ9 312 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 C14orf144Q96I85 54 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 ELOVL1Q9BW60 279 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 ACTR3CQ9C0K3 210 aaPredicted RBP13.76□□□□□ -0.21
PDZD4-202ENST00000393758 CDH20Q9HBT6 801 aa13.76□□□□□ -0.21
PDZD4-202ENST00000393758 H0Y980 276 aa13.75□□□□□ -0.21
PDZD4-202ENST00000393758 UCP1P25874 307 aa13.75□□□□□ -0.21
PDZD4-202ENST00000393758 EPHA8P29322 1005 aaPredicted RBP13.75□□□□□ -0.21
PDZD4-202ENST00000393758 SRD5A2P31213 254 aa13.75□□□□□ -0.21
PDZD4-202ENST00000393758 H2BFWTQ7Z2G1 175 aa13.75□□□□□ -0.21
PDZD4-202ENST00000393758 TGIF2LXQ8IUE1 241 aa13.75□□□□□ -0.21
PDZD4-202ENST00000393758 OR4X1Q8NH49 305 aa13.75□□□□□ -0.21
PDZD4-202ENST00000393758 HIST1H2BLQ99880 126 aa13.75□□□□□ -0.21
PDZD4-202ENST00000393758 BOKQ9UMX3 212 aaPredicted RBP13.75□□□□□ -0.21
PDZD4-202ENST00000393758 USF3Q68DE3 2245 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms