RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 AMY1AP04745 511 aa18.46■□□□□ 0.55
HMGA2-202ENST00000393577 AMY2AP04746 511 aa18.46■□□□□ 0.55
HMGA2-202ENST00000393577 TMEM11P17152 192 aa18.46■□□□□ 0.55
HMGA2-202ENST00000393577 IL3RAP26951 378 aa18.46■□□□□ 0.55
HMGA2-202ENST00000393577 MOB3BQ86TA1 216 aa18.46■□□□□ 0.55
HMGA2-202ENST00000393577 ZNF439Q8NDP4 499 aa18.46■□□□□ 0.55
HMGA2-202ENST00000393577 OR51D1Q8NGF3 324 aa18.46■□□□□ 0.55
HMGA2-202ENST00000393577 FAM110DQ8TAY7 271 aaPredicted RBP18.46■□□□□ 0.55
HMGA2-202ENST00000393577 URM1Q9BTM9 101 aaKnown RBP18.46■□□□□ 0.55
HMGA2-202ENST00000393577 MOB4Q9Y3A3 225 aa18.46■□□□□ 0.55
HMGA2-202ENST00000393577 IGHV1-3A0A0C4DH29 117 aa18.45■□□□□ 0.54
HMGA2-202ENST00000393577 IGKV1D-33P01593 117 aa18.45■□□□□ 0.54
HMGA2-202ENST00000393577 IGKV1-33P01594 117 aa18.45■□□□□ 0.54
HMGA2-202ENST00000393577 LPLP06858 475 aa18.45■□□□□ 0.54
HMGA2-202ENST00000393577 CD28P10747 220 aa18.45■□□□□ 0.54
HMGA2-202ENST00000393577 GNMTQ14749 295 aa18.45■□□□□ 0.54
HMGA2-202ENST00000393577 SLC25A48Q6ZT89 311 aaKnown RBP18.45■□□□□ 0.54
HMGA2-202ENST00000393577 ZNF554Q86TJ5 538 aa18.45■□□□□ 0.54
HMGA2-202ENST00000393577 SPARTQ8N0X7 666 aa18.45■□□□□ 0.54
HMGA2-202ENST00000393577 WIPF2Q8TF74 440 aaPredicted RBP18.45■□□□□ 0.54
HMGA2-202ENST00000393577 OR2S2Q9NQN1 319 aa18.45■□□□□ 0.54
HMGA2-202ENST00000393577 PLEKHJ1Q9NW61 149 aa18.45■□□□□ 0.54
HMGA2-202ENST00000393577 IGHV3-72A0A0B4J1Y9 119 aa18.44■□□□□ 0.54
HMGA2-202ENST00000393577 M0QZK8 103 aa18.44■□□□□ 0.54
HMGA2-202ENST00000393577 SOCS1O15524 211 aa18.44■□□□□ 0.54
HMGA2-202ENST00000393577 ZNF134P52741 427 aa18.44■□□□□ 0.54
HMGA2-202ENST00000393577 HNF4GQ14541 408 aa18.44■□□□□ 0.54
HMGA2-202ENST00000393577 CT45A1Q5HYN5 189 aa18.44■□□□□ 0.54
HMGA2-202ENST00000393577 C9orf152Q5JTZ5 239 aa18.44■□□□□ 0.54
HMGA2-202ENST00000393577 HES5Q5TA89 166 aa18.44■□□□□ 0.54
HMGA2-202ENST00000393577 UBE2UQ5VVX9 321 aa18.44■□□□□ 0.54
HMGA2-202ENST00000393577 CD200R1LQ6Q8B3 271 aa18.44■□□□□ 0.54
HMGA2-202ENST00000393577 LYG1Q8N1E2 194 aa18.44■□□□□ 0.54
HMGA2-202ENST00000393577 OR52L2PQ8NGH6 319 aa18.44■□□□□ 0.54
HMGA2-202ENST00000393577 CT45A3Q8NHU0 189 aa18.44■□□□□ 0.54
HMGA2-202ENST00000393577 RTN4IP1Q8WWV3 396 aaPredicted RBP18.44■□□□□ 0.54
HMGA2-202ENST00000393577 ST6GALNAC6Q969X2 333 aa18.44■□□□□ 0.54
HMGA2-202ENST00000393577 FAM3DQ96BQ1 224 aa18.44■□□□□ 0.54
HMGA2-202ENST00000393577 YTHDF1Q9BYJ9 559 aaKnown RBP18.44■□□□□ 0.54
HMGA2-202ENST00000393577 CHMP1AQ9HD42 196 aaPredicted RBP18.44■□□□□ 0.54
HMGA2-202ENST00000393577 RRP15Q9Y3B9 282 aaKnown RBP18.44■□□□□ 0.54
HMGA2-202ENST00000393577 TRDV1A0A1B0GX56 115 aa18.43■□□□□ 0.54
HMGA2-202ENST00000393577 SHISA3A0PJX4 238 aa18.43■□□□□ 0.54
HMGA2-202ENST00000393577 MYL9P24844 172 aa18.43■□□□□ 0.54
HMGA2-202ENST00000393577 PSMB9P28065 219 aa18.43■□□□□ 0.54
HMGA2-202ENST00000393577 PSMD7P51665 324 aa18.43■□□□□ 0.54
HMGA2-202ENST00000393577 HMGN3Q15651 99 aa18.43■□□□□ 0.54
HMGA2-202ENST00000393577 MORN2Q502X0 79 aa18.43■□□□□ 0.54
HMGA2-202ENST00000393577 STEAP1Q9UHE8 339 aa18.43■□□□□ 0.54
HMGA2-202ENST00000393577 JPT1Q9UK76 154 aa18.43■□□□□ 0.54
HMGA2-202ENST00000393577 TRAV1-2A0A0B4J238 106 aa18.42■□□□□ 0.54
HMGA2-202ENST00000393577 PDCD5O14737 125 aa18.42■□□□□ 0.54
HMGA2-202ENST00000393577 PPP1CCP36873 323 aaKnown RBP18.42■□□□□ 0.54
HMGA2-202ENST00000393577 OR10A3P58181 314 aa18.42■□□□□ 0.54
HMGA2-202ENST00000393577 NSUN5P1Q3KNT7 163 aa18.42■□□□□ 0.54
HMGA2-202ENST00000393577 C2orf76Q3KRA6 126 aa18.42■□□□□ 0.54
HMGA2-202ENST00000393577 Q6ZPA2 131 aa18.42■□□□□ 0.54
HMGA2-202ENST00000393577 FAM89BQ8N5H3 189 aa18.42■□□□□ 0.54
HMGA2-202ENST00000393577 SETD6Q8TBK2 473 aa18.42■□□□□ 0.54
HMGA2-202ENST00000393577 LRRC42Q9Y546 428 aa18.42■□□□□ 0.54
HMGA2-202ENST00000393577 NAPSAO96009 420 aa18.41■□□□□ 0.54
HMGA2-202ENST00000393577 VEGFCP49767 419 aa18.41■□□□□ 0.54
HMGA2-202ENST00000393577 ZNF137PP52743 207 aa18.41■□□□□ 0.54
HMGA2-202ENST00000393577 HTD2P86397 168 aa18.41■□□□□ 0.54
HMGA2-202ENST00000393577 C22orf42Q6IC83 251 aa18.41■□□□□ 0.54
HMGA2-202ENST00000393577 TGIF2LXQ8IUE1 241 aa18.41■□□□□ 0.54
HMGA2-202ENST00000393577 IZUMO1Q8IYV9 350 aa18.41■□□□□ 0.54
HMGA2-202ENST00000393577 C5orf56Q8N8D9 126 aa18.41■□□□□ 0.54
HMGA2-202ENST00000393577 FCGR1BQ92637 280 aa18.41■□□□□ 0.54
HMGA2-202ENST00000393577 GALMQ96C23 342 aa18.41■□□□□ 0.54
HMGA2-202ENST00000393577 CITED2Q99967 270 aaPredicted RBP18.41■□□□□ 0.54
HMGA2-202ENST00000393577 HDHD3Q9BSH5 251 aaPredicted RBP18.41■□□□□ 0.54
HMGA2-202ENST00000393577 AK3Q9UIJ7 227 aa18.41■□□□□ 0.54
HMGA2-202ENST00000393577 MEGF8Q7Z7M0 2845 aa18.4■□□□□ 0.54
HMGA2-202ENST00000393577 TMEM272A0A1B0GTI8 110 aa18.4■□□□□ 0.54
HMGA2-202ENST00000393577 FOXI3A8MTJ6 420 aaPredicted RBP18.4■□□□□ 0.54
HMGA2-202ENST00000393577 LDLRAD4O15165 306 aa18.4■□□□□ 0.54
HMGA2-202ENST00000393577 RANBP1P43487 201 aa18.4■□□□□ 0.54
HMGA2-202ENST00000393577 PLA2G7Q13093 441 aa18.4■□□□□ 0.54
HMGA2-202ENST00000393577 ZNF880Q6PDB4 577 aa18.4■□□□□ 0.54
HMGA2-202ENST00000393577 CENPVQ7Z7K6 275 aaPredicted RBP18.4■□□□□ 0.54
HMGA2-202ENST00000393577 OR5AU1Q8NGC0 362 aa18.4■□□□□ 0.54
HMGA2-202ENST00000393577 EAF1Q96JC9 268 aaPredicted RBP18.4■□□□□ 0.54
HMGA2-202ENST00000393577 ABHD14AQ9BUJ0 271 aa18.4■□□□□ 0.54
HMGA2-202ENST00000393577 ABRACLQ9P1F3 81 aa18.4■□□□□ 0.54
HMGA2-202ENST00000393577 TXNL1O43396 289 aa18.39■□□□□ 0.53
HMGA2-202ENST00000393577 RAB3BP20337 219 aa18.39■□□□□ 0.53
HMGA2-202ENST00000393577 GALP22466 123 aa18.39■□□□□ 0.53
HMGA2-202ENST00000393577 TMEM50BP56557 158 aa18.39■□□□□ 0.53
HMGA2-202ENST00000393577 EBI3Q14213 229 aa18.39■□□□□ 0.53
HMGA2-202ENST00000393577 STEAP3Q658P3 488 aa18.39■□□□□ 0.53
HMGA2-202ENST00000393577 ZNF773Q6PK81 442 aa18.39■□□□□ 0.53
HMGA2-202ENST00000393577 MOB1BQ7L9L4 216 aa18.39■□□□□ 0.53
HMGA2-202ENST00000393577 NDUFA11Q86Y39 141 aa18.39■□□□□ 0.53
HMGA2-202ENST00000393577 IL1F10Q8WWZ1 152 aa18.39■□□□□ 0.53
HMGA2-202ENST00000393577 ARHGAP5-AS1Q96IT6 56 aa18.39■□□□□ 0.53
HMGA2-202ENST00000393577 HSF4Q9ULV5 492 aa18.39■□□□□ 0.53
HMGA2-202ENST00000393577 IFITM5A6NNB3 132 aa18.38■□□□□ 0.53
HMGA2-202ENST00000393577 ZNF736B4DX44 427 aaPredicted RBP18.38■□□□□ 0.53
HMGA2-202ENST00000393577 FGF16O43320 207 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms