RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 VSTM2AQ8TAG5 236 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 MRPL30Q8TCC3 161 aaKnown RBP11.7□□□□□ -0.54
GSE1-202ENST00000393243 CCL13Q99616 98 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 DTX4Q9Y2E6 619 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 ELOA3CA0A087WX78 387 aaPredicted RBP11.7□□□□□ -0.54
GSE1-202ENST00000393243 B4DEV8 164 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 EPHA8P29322 1005 aaPredicted RBP11.7□□□□□ -0.54
GSE1-202ENST00000393243 ATG4DQ86TL0 474 aaPredicted RBP11.7□□□□□ -0.54
GSE1-202ENST00000393243 C16orf92Q96LL3 132 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 NRXN3Q9Y4C0 1643 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 CENPVL1A0A0U1RR11 272 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 FXYD3Q14802 87 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 ZNF343Q6P1L6 599 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 PGLYRP3Q96LB9 341 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 TPRP12270 2363 aaKnown RBP11.7□□□□□ -0.54
GSE1-202ENST00000393243 IGLV3-16A0A075B6K0 115 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 NUBP1P53384 320 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 TRA2AQ13595 282 aaKnown RBP eCLIP11.7□□□□□ -0.541e-6■□□□□ 8.4
GSE1-202ENST00000393243 GGTLC2Q14390 218 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 DEGS2Q6QHC5 323 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 ATOH7Q8N100 152 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 CYB561D1Q8N8Q1 229 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 LEAP2Q969E1 77 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 ZNF385AQ96PM9 386 aaKnown RBP11.7□□□□□ -0.54
GSE1-202ENST00000393243 HIGD1AQ9Y241 93 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 OR2W1Q9Y3N9 320 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 CCL21O00585 134 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 PDE6DO43924 150 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 IGKV3-20P01619 116 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 ADRA2AP08913 450 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 KLK2P20151 261 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 KIR2DL1P43626 348 aaPredicted RBP11.7□□□□□ -0.54
GSE1-202ENST00000393243 KIR2DL2P43627 348 aaPredicted RBP11.7□□□□□ -0.54
GSE1-202ENST00000393243 PNRC1Q12796 327 aaPredicted RBP11.7□□□□□ -0.54
GSE1-202ENST00000393243 SLC25A53Q5H9E4 307 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 HSPB9Q9BQS6 159 aa11.7□□□□□ -0.54
GSE1-202ENST00000393243 VSIG10L2P0DP72 767 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 OGG1O15527 345 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 DEDDO75618 318 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 OR2A4O95047 310 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 CD99P14209 185 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 OR2A7Q96R45 310 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 ANGPTL4Q9BY76 406 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 CES1P1Q9UKY3 287 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 MCM3APO60318 1980 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 ICE1Q9Y2F5 2266 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 HIST1H1EP10412 219 aaKnown RBP11.69□□□□□ -0.54
GSE1-202ENST00000393243 SPATA45Q537H7 98 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 MS4A3Q96HJ5 214 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 ADTRPQ96IZ2 230 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 SPTBP11277 2137 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 IGHV5-10-1A0A0J9YXX1 117 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 C19orf54Q5BKX5 351 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 BEX4Q9NWD9 120 aaPredicted RBP11.69□□□□□ -0.54
GSE1-202ENST00000393243 OR5AC2Q9NZP5 309 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 IGHV3OR16-10A0A075B7F0 116 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 NDUFB4O95168 129 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 PAFAH1B2P68402 229 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 KCNMB1Q16558 191 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 WDFY1Q8IWB7 410 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 SGMS2Q8NHU3 365 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 NXPH1P58417 271 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 ZNF738Q8NE65 137 aa11.69□□□□□ -0.54
GSE1-202ENST00000393243 C1QL1O75973 258 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 RRN3P1Q2M238 152 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 FOXC2Q99958 501 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 OPN3Q9H1Y3 402 aaPredicted RBP11.68□□□□□ -0.54
GSE1-202ENST00000393243 PGA4P0DJD7 388 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 PGA5P0DJD9 388 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 VSIG8P0DPA2 414 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 TRIP12Q14669 1992 aaPredicted RBP11.68□□□□□ -0.54
GSE1-202ENST00000393243 HERPUD1Q15011 391 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 GCSAMLQ5JQS6 135 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 VDAC1P21796 283 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 GHITMQ9H3K2 345 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 OPN4Q9UHM6 478 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 HSPB1P04792 205 aaKnown RBP11.68□□□□□ -0.54
GSE1-202ENST00000393243 ZNF735P0CB33 412 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 ZNF256Q9Y2P7 627 aaPredicted RBP11.68□□□□□ -0.54
GSE1-202ENST00000393243 A0A1W2PP11 408 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 FAM181BA6NEQ2 426 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 GALP22466 123 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 RPL31P62899 125 aaKnown RBP11.68□□□□□ -0.54
GSE1-202ENST00000393243 DCAF12L2Q5VW00 463 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 GPA33Q99795 319 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 DOCK2Q92608 1830 aa11.68□□□□□ -0.54
GSE1-202ENST00000393243 TMEM189A5PLL7 270 aa11.67□□□□□ -0.54
GSE1-202ENST00000393243 TMEM127O75204 238 aa11.67□□□□□ -0.54
GSE1-202ENST00000393243 TM4SF20Q53R12 229 aa11.67□□□□□ -0.54
GSE1-202ENST00000393243 KIAA1217Q5T5P2 1943 aa11.67□□□□□ -0.54
GSE1-202ENST00000393243 PF4V1P10720 104 aa11.67□□□□□ -0.54
GSE1-202ENST00000393243 PKIAP61925 76 aa11.67□□□□□ -0.54
GSE1-202ENST00000393243 ZNF826PQ6ZT77 177 aa11.67□□□□□ -0.54
GSE1-202ENST00000393243 ZNF441Q8N8Z8 693 aa11.67□□□□□ -0.54
GSE1-202ENST00000393243 TMEM52Q8NDY8 209 aa11.67□□□□□ -0.54
GSE1-202ENST00000393243 MRPL13Q9BYD1 178 aaKnown RBP11.67□□□□□ -0.54
GSE1-202ENST00000393243 PLAC1Q9HBJ0 212 aa11.67□□□□□ -0.54
GSE1-202ENST00000393243 PRNDQ9UKY0 176 aa11.67□□□□□ -0.54
GSE1-202ENST00000393243 LMX1BO60663 402 aa11.67□□□□□ -0.54
GSE1-202ENST00000393243 PRSS23O95084 383 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms