RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 ZNF816Q0VGE8 651 aaPredicted RBP10.8□□□□□ -0.68
USP44-202ENST00000393091 MAPK1IP1LQ8NDC0 245 aa10.8□□□□□ -0.68
USP44-202ENST00000393091 BEST4Q8NFU0 473 aa10.8□□□□□ -0.68
USP44-202ENST00000393091 OR52I2Q8NH67 350 aa10.8□□□□□ -0.68
USP44-202ENST00000393091 OR1L1Q8NH94 360 aa10.8□□□□□ -0.68
USP44-202ENST00000393091 NANPQ8TBE9 248 aa10.8□□□□□ -0.68
USP44-202ENST00000393091 AGMATQ9BSE5 352 aa10.8□□□□□ -0.68
USP44-202ENST00000393091 WDR12Q9GZL7 423 aaKnown RBP10.8□□□□□ -0.68
USP44-202ENST00000393091 ONECUT1Q9UBC0 465 aa10.8□□□□□ -0.68
USP44-202ENST00000393091 CDC42EP3Q9UKI2 254 aa10.8□□□□□ -0.68
USP44-202ENST00000393091 SDCBPO00560 298 aaPredicted RBP10.79□□□□□ -0.68
USP44-202ENST00000393091 RAB7AP51149 207 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 ARF6P62330 175 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 SCGB2A2Q13296 93 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 DYRK1AQ13627 763 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 CDK10Q15131 360 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 FAM120AOSQ5T036 256 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 CLEC9AQ6UXN8 241 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 NECAP2Q9NVZ3 263 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 J3QR06 171 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 SMAD7O15105 426 aaKnown RBP10.79□□□□□ -0.68
USP44-202ENST00000393091 LANCL1O43813 399 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 SCTP09683 121 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 GSTT2P0CG29 244 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 GSTT2BP0CG30 244 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 UCP3P55916 312 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 EIF4EBP1Q13541 118 aaPredicted RBP10.79□□□□□ -0.68
USP44-202ENST00000393091 HLA-DRB5Q30154 266 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 PRAMEF5Q5TYX0 476 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 IZUMO1Q8IYV9 350 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 CHMP1AQ9HD42 196 aaPredicted RBP10.79□□□□□ -0.68
USP44-202ENST00000393091 AMMECR1Q9Y4X0 333 aaPredicted RBP10.79□□□□□ -0.68
USP44-202ENST00000393091 MALRD1Q5VYJ5 2156 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 TXNL1O43396 289 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 SLC22A5O76082 557 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 PPP5CP53041 499 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 PRRX1P54821 245 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 KLF9Q13886 244 aaPredicted RBP10.79□□□□□ -0.68
USP44-202ENST00000393091 LHFPL1Q86WI0 220 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 ODF3L1Q8IXM7 274 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 OR4P4Q8NGL7 312 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 C7orf50Q9BRJ6 194 aaKnown RBP10.79□□□□□ -0.68
USP44-202ENST00000393091 PCGF1Q9BSM1 259 aa10.79□□□□□ -0.68
USP44-202ENST00000393091 ZMAT3Q9HA38 289 aaKnown RBP10.79□□□□□ -0.68
USP44-202ENST00000393091 RBBP9O75884 186 aa10.78□□□□□ -0.68
USP44-202ENST00000393091 HNF1AP20823 631 aa10.78□□□□□ -0.68
USP44-202ENST00000393091 TAS2R19P59542 299 aa10.78□□□□□ -0.68
USP44-202ENST00000393091 IL18Q14116 193 aa10.78□□□□□ -0.68
USP44-202ENST00000393091 FAM131AQ6UXB0 335 aa10.78□□□□□ -0.68
USP44-202ENST00000393091 ZNF833PQ6ZTB9 187 aa10.78□□□□□ -0.68
USP44-202ENST00000393091 ARRDC1Q8N5I2 433 aa10.78□□□□□ -0.68
USP44-202ENST00000393091 EDARADDQ8WWZ3 215 aa10.78□□□□□ -0.68
USP44-202ENST00000393091 MALSU1Q96EH3 234 aa10.78□□□□□ -0.68
USP44-202ENST00000393091 MMP28Q9H239 520 aa10.78□□□□□ -0.68
USP44-202ENST00000393091 SPG11Q96JI7 2443 aa10.78□□□□□ -0.68
USP44-202ENST00000393091 DGCR2P98153 550 aa10.78□□□□□ -0.68
USP44-202ENST00000393091 TMEM86BQ8N661 226 aa10.78□□□□□ -0.68
USP44-202ENST00000393091 CCDC107Q8WV48 283 aa10.78□□□□□ -0.68
USP44-202ENST00000393091 TEX15Q9BXT5 2789 aa10.78□□□□□ -0.68
USP44-202ENST00000393091 NPFFO15130 113 aa10.77□□□□□ -0.68
USP44-202ENST00000393091 ZNF735P0CB33 412 aa10.77□□□□□ -0.68
USP44-202ENST00000393091 ZNF846Q147U1 533 aa10.77□□□□□ -0.68
USP44-202ENST00000393091 MEF2DQ14814 521 aa10.77□□□□□ -0.68
USP44-202ENST00000393091 ABHD12Q8N2K0 398 aa10.77□□□□□ -0.68
USP44-202ENST00000393091 BUB1B-PAK6H3BSN5 160 aa10.77□□□□□ -0.69
USP44-202ENST00000393091 ECI1P42126 302 aa10.77□□□□□ -0.69
USP44-202ENST00000393091 THAP7Q9BT49 309 aaPredicted RBP10.77□□□□□ -0.69
USP44-202ENST00000393091 IFT46Q9NQC8 304 aa10.77□□□□□ -0.69
USP44-202ENST00000393091 ZNF230Q9UIE0 474 aaPredicted RBP10.77□□□□□ -0.69
USP44-202ENST00000393091 A0A0A6YYJ9 748 aa10.77□□□□□ -0.69
USP44-202ENST00000393091 FAM90A9PA6NNJ1 464 aa10.77□□□□□ -0.69
USP44-202ENST00000393091 CT45A1Q5HYN5 189 aa10.77□□□□□ -0.69
USP44-202ENST00000393091 THNSL2Q86YJ6 484 aa10.77□□□□□ -0.69
USP44-202ENST00000393091 CADM3Q8N126 398 aa10.77□□□□□ -0.69
USP44-202ENST00000393091 GVQW1Q8N7I0 195 aa10.77□□□□□ -0.69
USP44-202ENST00000393091 ZBTB34Q8NCN2 500 aa10.77□□□□□ -0.69
USP44-202ENST00000393091 CT45A3Q8NHU0 189 aa10.77□□□□□ -0.69
USP44-202ENST00000393091 IFI27L2Q9H2X8 130 aa10.77□□□□□ -0.69
USP44-202ENST00000393091 FAM212BQ9NTI7 297 aaPredicted RBP10.77□□□□□ -0.69
USP44-202ENST00000393091 OR10J5Q8NHC4 309 aa10.76□□□□□ -0.69
USP44-202ENST00000393091 ZNF251Q9BRH9 671 aa10.76□□□□□ -0.69
USP44-202ENST00000393091 OR2W1Q9Y3N9 320 aa10.76□□□□□ -0.69
USP44-202ENST00000393091 CLDN34H7C241 214 aa10.76□□□□□ -0.69
USP44-202ENST00000393091 CRLF1O75462 422 aa10.76□□□□□ -0.69
USP44-202ENST00000393091 ZNF134P52741 427 aa10.76□□□□□ -0.69
USP44-202ENST00000393091 AP3S2P59780 193 aa10.76□□□□□ -0.69
USP44-202ENST00000393091 TAGLNQ01995 201 aaKnown RBP10.76□□□□□ -0.69
USP44-202ENST00000393091 EBI3Q14213 229 aa10.76□□□□□ -0.69
USP44-202ENST00000393091 SURF2Q15527 256 aaPredicted RBP10.76□□□□□ -0.69
USP44-202ENST00000393091 Q8N402 240 aa10.76□□□□□ -0.69
USP44-202ENST00000393091 MOB3AQ96BX8 217 aa10.76□□□□□ -0.69
USP44-202ENST00000393091 SUCNR1Q9BXA5 334 aa10.76□□□□□ -0.69
USP44-202ENST00000393091 PSG11Q9UQ72 335 aa10.76□□□□□ -0.69
USP44-202ENST00000393091 PTHLHP12272 177 aa10.75□□□□□ -0.69
USP44-202ENST00000393091 IGSF11Q5DX21 431 aa10.75□□□□□ -0.69
USP44-202ENST00000393091 SNX29P2Q8IUI4 249 aa10.75□□□□□ -0.69
USP44-202ENST00000393091 PIP4P2Q8N4L2 257 aa10.75□□□□□ -0.69
USP44-202ENST00000393091 ST6GALNAC5Q9BVH7 336 aa10.75□□□□□ -0.69
USP44-202ENST00000393091 YAE1D1Q9NRH1 226 aa10.75□□□□□ -0.69
USP44-202ENST00000393091 KLK11Q9UBX7 282 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms