RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 RELQ04864 619 aaPredicted RBP9.29□□□□□ -0.92
BRF1-204ENST00000392557 HIKESHIQ53FT3 197 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 BEND4Q6ZU67 534 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 MCEMP1Q8IX19 187 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 LYPD6BQ8NI32 183 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 ZNF488Q96MN9 340 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 SMCO3A2RU48 225 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 CD300LBA8K4G0 201 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 C21orf140B9A014 251 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 CA11O75493 328 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 IGHV2-70P01814 119 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 SFTPCP11686 197 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 HOXA5P20719 270 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 IDH3GP51553 393 aaPredicted RBP9.29□□□□□ -0.92
BRF1-204ENST00000392557 ELOBQ15370 118 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 SPANXN5Q5MJ07 72 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.29□□□□□ -0.92
BRF1-204ENST00000392557 MKXQ8IYA7 352 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 RPUSD4Q96CM3 377 aaKnown RBP9.29□□□□□ -0.92
BRF1-204ENST00000392557 SF3B5Q9BWJ5 86 aaKnown RBP9.29□□□□□ -0.92
BRF1-204ENST00000392557 LYRM2Q9NU23 88 aaPredicted RBP9.29□□□□□ -0.92
BRF1-204ENST00000392557 TMEM238LA0A1B0GVL6 79 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 PITX3O75364 302 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 CTSSP25774 331 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 MEOX1P50221 254 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 FOXG1P55316 489 aaPredicted RBP9.29□□□□□ -0.92
BRF1-204ENST00000392557 TMEM251Q8N6I4 163 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 OR1K1Q8NGR3 316 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 C10orf35Q96D05 121 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 RBMXL1Q96E39 390 aaKnown RBP9.29□□□□□ -0.92
BRF1-204ENST00000392557 SPRY4Q9C004 299 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 ZNF703Q9H7S9 590 aaPredicted RBP9.29□□□□□ -0.92
BRF1-204ENST00000392557 UFSP2Q9NUQ7 469 aa9.29□□□□□ -0.92
BRF1-204ENST00000392557 ERRFI1Q9UJM3 462 aaPredicted RBP9.29□□□□□ -0.92
BRF1-204ENST00000392557 IGKV1D-13A0A0B4J2D9 117 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 TSTD3H0UI37 97 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 HIST1H2BKO60814 126 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 WDR1O75083 606 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 HIST1H2BJP06899 126 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 TRGC1P0CF51 173 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 IGKV1-13P0DP09 117 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 VDAC1P21796 283 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 HIST1H2BOP23527 126 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 HIST1H2BBP33778 126 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 HIST1H2BDP58876 126 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 HIST1H2BCP62807 126 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 EIF3IQ13347 325 aaKnown RBP9.28□□□□□ -0.92
BRF1-204ENST00000392557 GAMTQ14353 236 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 HIST2H2BEQ16778 126 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.28□□□□□ -0.92
BRF1-204ENST00000392557 SELENOHQ8IZQ5 122 aaKnown RBP9.28□□□□□ -0.92
BRF1-204ENST00000392557 OR4D5Q8NGN0 318 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 HIST1H2BHQ93079 126 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 HIST1H2BNQ99877 126 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 HIST1H2BMQ99879 126 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 GPR35Q9HC97 309 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 DMRT1Q9Y5R6 373 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 ABCA4P78363 2273 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 CACNA1BQ00975 2339 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 ZNF732B4DXR9 585 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 PGA5P0DJD9 388 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 CCL11P51671 97 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 PMP22Q01453 160 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 ICAM4Q14773 271 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 ARV1Q9H2C2 271 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 BTBD17A6NE02 478 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 SEC14L6B5MCN3 397 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 GFRA1P56159 465 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 ARF1P84077 181 aaKnown RBP9.28□□□□□ -0.92
BRF1-204ENST00000392557 TMEM211Q6ICI0 200 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 OR10J5Q8NHC4 309 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 HPSE2Q8WWQ2 592 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 OR2H1Q9GZK4 316 aa9.28□□□□□ -0.92
BRF1-204ENST00000392557 OR6C6A6NF89 314 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 SYNGR3O43761 229 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 TUSC2O75896 110 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 TMEM50AO95807 157 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 NUBP1P53384 320 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 SSTP61278 116 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 PCBD1P61457 104 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 WDR25Q64LD2 544 aaPredicted RBP9.27□□□□□ -0.93
BRF1-204ENST00000392557 SPSB3Q6PJ21 355 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 ADGRG7Q96K78 797 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 FER1L6-AS2Q96M78 137 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 ATP5SQ99766 215 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 CACNG5Q9UF02 275 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 NKX2-8O15522 239 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 DFFBO76075 338 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 SOD3P08294 240 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 PSG2P11465 335 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 PRDX4Q13162 271 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 KHDC3LQ587J8 217 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 FAM185AQ8N0U4 392 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 CPT1CQ8TCG5 803 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 FRZBQ92765 325 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 SCRT1Q9BWW7 348 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 ARFGEF3Q5TH69 2177 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 OR5H1A6NKK0 313 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 CLDN34H7C241 214 aa9.27□□□□□ -0.93
BRF1-204ENST00000392557 ANKRD39Q53RE8 183 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms