RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 DHRS11Q6UWP2 260 aa13.93□□□□□ -0.18
PTPRN2-201ENST00000389413 EIF4E3Q8N5X7 224 aaKnown RBP13.93□□□□□ -0.18
PTPRN2-201ENST00000389413 ZNF355PQ9NSJ1 428 aa13.93□□□□□ -0.18
PTPRN2-201ENST00000389413 FKBP11Q9NYL4 201 aa13.93□□□□□ -0.18
PTPRN2-201ENST00000389413 ABCA7Q8IZY2 2146 aa13.93□□□□□ -0.18
PTPRN2-201ENST00000389413 CHEK1O14757 476 aa13.93□□□□□ -0.18
PTPRN2-201ENST00000389413 NDUFB3O43676 98 aa13.93□□□□□ -0.18
PTPRN2-201ENST00000389413 MST1P26927 711 aa13.93□□□□□ -0.18
PTPRN2-201ENST00000389413 VMA21Q3ZAQ7 101 aa13.93□□□□□ -0.18
PTPRN2-201ENST00000389413 TMEM251Q8N6I4 163 aa13.93□□□□□ -0.18
PTPRN2-201ENST00000389413 GMPPAQ96IJ6 420 aaPredicted RBP13.93□□□□□ -0.18
PTPRN2-201ENST00000389413 SNX22Q96L94 193 aa13.93□□□□□ -0.18
PTPRN2-201ENST00000389413 TUBD1Q9UJT1 453 aa13.93□□□□□ -0.18
PTPRN2-201ENST00000389413 THSD7BQ9C0I4 1608 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 LTBRP36941 435 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 PMS2P11Q13670 270 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 LRRC10Q5BKY1 277 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 NSUN5P2Q63ZY6 315 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 MRPL30Q8TCC3 161 aaKnown RBP13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 FBLN5Q9UBX5 448 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 PGLYRP1O75594 196 aaPredicted RBP13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 HSPB1P04792 205 aaKnown RBP13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 CT45A10P0DMU9 189 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 TNFAIP6P98066 277 aaPredicted RBP13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 AESQ08117 197 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 SELENOHQ8IZQ5 122 aaKnown RBP13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 TIMD4Q96H15 378 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 PRO1933Q9H354 126 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 HEXA-AS1Q9H8Q6 139 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 R4GN57 208 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 SYNGR1O43759 233 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 GNG4P50150 75 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 KRTDAPP60985 99 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 MRPS11P82912 194 aaKnown RBP13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 TRIP6Q15654 476 aaKnown RBP13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 GABRA6Q16445 453 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 FAM162BQ5T6X4 162 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 SAXO1Q8IYX7 474 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 MRPL13Q9BYD1 178 aaKnown RBP13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 HES4Q9HCC6 221 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 PILRBQ9UKJ0 227 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 PAGE4O60829 102 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 HIST1H3AP68431 136 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 SPEM2Q0P670 501 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 SMIM15Q7Z3B0 74 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 FGF11Q92914 225 aa13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 RTBDNQ9BSG5 229 aaPredicted RBP13.92□□□□□ -0.18
PTPRN2-201ENST00000389413 LOC105371267A0A1B0GV96 52 aa13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 hADV38S2A0JD32 116 aa13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 SLC23A3Q6PIS1 610 aa13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 RSG1Q9BU20 258 aa13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 FNDC1Q4ZHG4 1894 aaPredicted RBP13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 RANP62826 216 aaKnown RBP13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 SUMO1P63165 101 aaKnown RBP13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 SLC25A53Q5H9E4 307 aa13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 DHRS7BQ6IAN0 325 aaPredicted RBP13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 CLCF1Q9UBD9 225 aa13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 NAT8BQ9UHF3 227 aa13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 ZNF835Q9Y2P0 537 aa13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 SDK2Q58EX2 2172 aa13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 H0Y8G0 127 aa13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 ZNHIT1O43257 154 aa13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 AGFG2O95081 481 aa13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 LINC00271P0C7V0 271 aa13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 SHISA5Q8N114 240 aa13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 NFAM1Q8NET5 270 aaPredicted RBP13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 POM121Q96HA1 1249 aa13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 MS4A10Q96PG2 267 aa13.91□□□□□ -0.18
PTPRN2-201ENST00000389413 PTBP3O95758 552 aaKnown RBP13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 PPP1CCP36873 323 aaKnown RBP13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 CSN1S1P47710 185 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 NPBWR2P48146 333 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 LINC00518Q8N0U6 118 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 PACRGQ96M98 296 aaPredicted RBP13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 ZNF735P0CB33 412 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 CARHSP1Q9Y2V2 147 aaKnown RBP13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 FCN1O00602 326 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 TOMM20LQ6UXN7 152 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 BHLHA15Q7RTS1 189 aaPredicted RBP13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 GPHA2Q96T91 129 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 SH3BGRL3Q9H299 93 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 GAL3ST2Q9H3Q3 398 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 CLN8Q9UBY8 286 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 EP400Q96L91 3159 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 COX5BP10606 129 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 SCGB2A2Q13296 93 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 AARDQ4LEZ3 155 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 ZNF880Q6PDB4 577 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 GPR146Q96CH1 333 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 IL36GQ9NZH8 169 aa13.9□□□□□ -0.18
PTPRN2-201ENST00000389413 HSBP1O75506 76 aa13.89□□□□□ -0.19
PTPRN2-201ENST00000389413 PKIBQ9C010 78 aa13.89□□□□□ -0.19
PTPRN2-201ENST00000389413 MSL2Q9HCI7 577 aa13.89□□□□□ -0.19
PTPRN2-201ENST00000389413 DLL3Q9NYJ7 618 aa13.89□□□□□ -0.19
PTPRN2-201ENST00000389413 PITPNC1Q9UKF7 332 aa13.89□□□□□ -0.19
PTPRN2-201ENST00000389413 IGLV3-12A0A075B6K2 115 aa13.89□□□□□ -0.19
PTPRN2-201ENST00000389413 CLN5O75503 358 aa13.89□□□□□ -0.19
PTPRN2-201ENST00000389413 OR2H2O95918 312 aa13.89□□□□□ -0.19
PTPRN2-201ENST00000389413 SUCLG1P53597 346 aaKnown RBP13.89□□□□□ -0.19
PTPRN2-201ENST00000389413 OR10G8Q8NGN5 311 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms