RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 HPRT1P00492 218 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 HIST1H1EP10412 219 aaKnown RBP13.94□□□□□ -0.18
COL2A1-202ENST00000380518 C19orf57Q0VDD7 668 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 SPRED2Q7Z698 418 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 KCNK17Q96T54 332 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 ORM1P02763 201 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 MMP9P14780 707 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 SRP14P37108 136 aaKnown RBP13.94□□□□□ -0.18
COL2A1-202ENST00000380518 TEX30Q5JUR7 227 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 C1orf100Q5SVJ3 147 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 DCAF12L2Q5VW00 463 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 OR5AU1Q8NGC0 362 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 RAB29O14966 203 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 ADAM11O75078 769 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 AMELYQ99218 206 aa13.94□□□□□ -0.18
COL2A1-202ENST00000380518 IGHV3OR15-7A0A075B7D8 119 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 IGLV1-36A0A0B4J1U3 117 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 CLDN14O95500 239 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 ISG15P05161 165 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 MELTFP08582 738 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 EIF4E3Q8N5X7 224 aaKnown RBP13.93□□□□□ -0.18
COL2A1-202ENST00000380518 WDR31Q8NA23 367 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 MS4A7Q9GZW8 240 aaPredicted RBP13.93□□□□□ -0.18
COL2A1-202ENST00000380518 PITPNC1Q9UKF7 332 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 PPIAL4EA0A075B759 164 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 PPIAL4DF5H284 164 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 PPIAL4FP0DN26 164 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 COL10A1Q03692 680 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 GPR132Q9UNW8 380 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 PPIAL4AQ9Y536 164 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 RCC1P18754 421 aaPredicted RBP13.93□□□□□ -0.18
COL2A1-202ENST00000380518 CXCL2P19875 107 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 P2RY6Q15077 328 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 MMDQ15546 238 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 A0A087X0M5 115 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 A0A1B0GX30 115 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 CD1BP29016 333 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 SULT1A2P50226 295 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 TUSC1Q2TAM9 212 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 SLC25A47Q6Q0C1 308 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 DHRS11Q6UWP2 260 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 TMEM252Q8N6L7 170 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 RAB24Q969Q5 203 aa13.93□□□□□ -0.18
COL2A1-202ENST00000380518 SLC25A10Q9UBX3 287 aaPredicted RBP13.93□□□□□ -0.18
COL2A1-202ENST00000380518 A0A1W2PP11 408 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 SNURFLB1AK76 121 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 ISLRO14498 428 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 BCL2P10415 239 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 CEBPEQ15744 281 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 CCDC144NLQ6NUI1 221 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 FAM214BQ7L5A3 538 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 TMEM251Q8N6I4 163 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 ZNF441Q8N8Z8 693 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 MAP1LC3CQ9BXW4 147 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 NPVFQ9HCQ7 196 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 OR51B2Q9Y5P1 312 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 KIAA1217Q5T5P2 1943 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 H0Y980 276 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 LRRC75AQ8NAA5 344 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 NRIP2Q9BQI9 281 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 SEMA7AO75326 666 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 RPL7P18124 248 aaKnown RBP13.92□□□□□ -0.18
COL2A1-202ENST00000380518 FAM222BQ8WU58 562 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 FAM90A10PA6NDY2 464 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 FAM90A18PA6NE21 464 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 FAM90A16PA6NEW6 464 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 FAM90A20PA6NIJ5 464 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 FAM90A8PA6NJQ4 464 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 FAM90A7PA6NKC0 464 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 FAM90A22PA8MWA6 464 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 FAM90A12PA8MX19 464 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 FAM90A5PA8MXJ8 464 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 FAM90A23PA8MXZ1 464 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 FAM90A15PP0C7V4 464 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 FAM90A13PP0C7W8 464 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 FAM90A14PP0C7W9 464 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 FAM90A24PP0C7X0 464 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 IER3P46695 156 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 UCP2P55851 309 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 PRSS53Q2L4Q9 553 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 LHFPL5Q8TAF8 219 aa13.92□□□□□ -0.18
COL2A1-202ENST00000380518 RGP1Q92546 391 aaPredicted RBP13.92□□□□□ -0.18
COL2A1-202ENST00000380518 IGHV1-45A0A0A0MS14 117 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 K7N7A8 449 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 PPOXP50336 477 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 IGSF11Q5DX21 431 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 CHAC2Q8WUX2 184 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 IL19Q9UHD0 177 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 MFSD2BA6NFX1 497 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 CD40P25942 277 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 TMEM222Q9H0R3 208 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 CORTO00230 105 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 NMBP08949 121 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 LDLRAD3Q86YD5 345 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 WFDC6Q9BQY6 131 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 OR2D3Q8NGH3 330 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 SLC25A38Q96DW6 304 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 OR5AC2Q9NZP5 309 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 TUBD1Q9UJT1 453 aa13.91□□□□□ -0.18
COL2A1-202ENST00000380518 ZFC3H1O60293 1989 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms