RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 K7EQS6 105 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 CA2P00918 260 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 DANCRP0C864 163 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 TMEM30BQ3MIR4 351 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 WDR54Q9H977 334 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 IGHV3-64DA0A0J9YX35 117 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 ASAH2BP0C7U1 165 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 SPATA45Q537H7 98 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 UNQ9370/PRO34162Q6UXP9 181 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 PRSS41Q7RTY9 318 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 DIRC2Q96SL1 478 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 COL5A3P25940 1745 aaPredicted RBP8.37□□□□□ -1.07
SNX1-202ENST00000380285 A0A0B4J293 547 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 DEFB108AA8MXU0 73 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 DXOO77932 396 aaKnown RBP8.37□□□□□ -1.07
SNX1-202ENST00000380285 GLIPR1P48060 266 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 INO80CQ6PI98 192 aaPredicted RBP8.37□□□□□ -1.07
SNX1-202ENST00000380285 SLC23A3Q6PIS1 610 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 SARGQ9BW04 601 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 CLEC1BQ9P126 229 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 KCNK7Q9Y2U2 307 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 IFITM2Q01629 132 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 TMEM45BQ96B21 275 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 MS4A3Q96HJ5 214 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 MSL2Q9HCI7 577 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 ZNF318Q5VUA4 2279 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 MED19A0JLT2 244 aaPredicted RBP8.37□□□□□ -1.07
SNX1-202ENST00000380285 GNG7O60262 68 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 RPS20P60866 119 aaKnown RBP8.37□□□□□ -1.07
SNX1-202ENST00000380285 ZNF385CQ66K41 422 aaPredicted RBP8.37□□□□□ -1.07
SNX1-202ENST00000380285 CYB5R2Q6BCY4 276 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 SAXO1Q8IYX7 474 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 OR4X1Q8NH49 305 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 FLYWCH2Q96CP2 140 aaKnown RBP8.37□□□□□ -1.07
SNX1-202ENST00000380285 ELOVL1Q9BW60 279 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 UFC1Q9Y3C8 167 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 RALGAPA2Q2PPJ7 1873 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 TRBV5-7A0A0A0MS05 114 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 H3BMH7 237 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 DRD3P35462 400 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 FAM27BQ5VT28 67 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 MRPL54Q6P161 138 aaKnown RBP8.37□□□□□ -1.07
SNX1-202ENST00000380285 RAB1BQ9H0U4 201 aa8.37□□□□□ -1.07
SNX1-202ENST00000380285 VENTXO95231 258 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 AMY1AP04745 511 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 COX6CP09669 75 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 HOXB1P14653 301 aaPredicted RBP8.36□□□□□ -1.07
SNX1-202ENST00000380285 DGAT2L7PQ6IED9 249 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 RFESDQ8TAC1 157 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 CDX2Q99626 313 aaPredicted RBP8.36□□□□□ -1.07
SNX1-202ENST00000380285 DDA1Q9BW61 102 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 CARHSP1Q9Y2V2 147 aaKnown RBP8.36□□□□□ -1.07
SNX1-202ENST00000380285 A0A1W2PPV9 198 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 SHISA8B8ZZ34 492 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 CFDP00746 253 aaPredicted RBP8.36□□□□□ -1.07
SNX1-202ENST00000380285 IZUMO4Q1ZYL8 232 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 NPIPB13A6NJU9 1138 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 NPIPB4C9JG80 1138 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 TRGC2P03986 189 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 FOLR2P14207 255 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 LDLRAD3Q86YD5 345 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 RASL10BQ96S79 203 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 HSPB9Q9BQS6 159 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 PSMG3Q9BT73 122 aaPredicted RBP8.36□□□□□ -1.07
SNX1-202ENST00000380285 PAXXQ9BUH6 204 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 MRPS18BQ9Y676 258 aaKnown RBP8.36□□□□□ -1.07
SNX1-202ENST00000380285 RAB29O14966 203 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 HKR1P10072 659 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 ERGP11308 486 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 UCP3P55916 312 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 FGF12P61328 243 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 LSM10Q969L4 123 aaKnown RBP8.36□□□□□ -1.07
SNX1-202ENST00000380285 SIAH2O43255 324 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 CD74P04233 296 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 PSG2P11465 335 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 PDCD1Q15116 288 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 DCAF12L2Q5VW00 463 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 TMEM252Q8N6L7 170 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 TRMT61AQ96FX7 289 aaKnown RBP8.36□□□□□ -1.07
SNX1-202ENST00000380285 SFXN3Q9BWM7 321 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 ZNF665Q9H7R5 613 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 ZNF256Q9Y2P7 627 aaPredicted RBP8.36□□□□□ -1.07
SNX1-202ENST00000380285 TMEM250H0YL14 139 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 RCC1P18754 421 aaPredicted RBP8.36□□□□□ -1.07
SNX1-202ENST00000380285 EFNB2P52799 333 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 NANOS3P60323 173 aaKnown RBP8.36□□□□□ -1.07
SNX1-202ENST00000380285 LEMD1Q68G75 181 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 OR2Y1Q8NGV0 311 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 DOK5Q9P104 306 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 WIPI2Q9Y4P8 454 aa8.36□□□□□ -1.07
SNX1-202ENST00000380285 KIR3DL2P43630 455 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 CEBPDP49716 269 aaPredicted RBP8.35□□□□□ -1.07
SNX1-202ENST00000380285 CXorf67Q86X51 503 aaPredicted RBP8.35□□□□□ -1.07
SNX1-202ENST00000380285 RAB1CQ92928 201 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 CLN8Q9UBY8 286 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 MFAP2P55001 183 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 TCL1AP56279 114 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 MARS2Q96GW9 593 aaKnown RBP8.35□□□□□ -1.07
SNX1-202ENST00000380285 GPR35Q9HC97 309 aa8.35□□□□□ -1.07
SNX1-202ENST00000380285 PLP1P60201 277 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms