RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 BSNQ9UPA5 3926 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 C20orf202A1L168 122 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 IL5P05113 134 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 UBBP0CG47 229 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 MPGP29372 298 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 FCGR2CP31995 323 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 ZNF133P52736 654 aaPredicted RBP9.24□□□□□ -0.93
NEDD9-201ENST00000379433 C5orf64Q2M2E5 130 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 DNM1P46Q6ZS02 220 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 ZNF826PQ6ZT77 177 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 PUSL1Q8N0Z8 303 aaKnown RBP9.24□□□□□ -0.93
NEDD9-201ENST00000379433 OR1J1Q8NGS3 322 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 HPSE2Q8WWQ2 592 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 EMG1Q92979 244 aaKnown RBP9.24□□□□□ -0.93
NEDD9-201ENST00000379433 Q96M66 194 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 TMEM56Q96MV1 263 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 TMEM56-RWDD3S4R434 201 aa9.24□□□□□ -0.93
NEDD9-201ENST00000379433 TRAPPC2LH3BP13 241 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 CDIPTO14735 213 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 CD74P04233 296 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 GIPP09681 153 aaPredicted RBP9.23□□□□□ -0.93
NEDD9-201ENST00000379433 BMP5P22003 454 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 PMELP40967 661 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 PTTG1IPP53801 180 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 LY6G6FQ5SQ64 297 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 LYG2Q86SG7 212 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 ZNF610Q8N9Z0 462 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 OR1K1Q8NGR3 316 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 POM121L2Q96KW2 1035 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 ZNF471Q9BX82 626 aaPredicted RBP9.23□□□□□ -0.93
NEDD9-201ENST00000379433 FGF23Q9GZV9 251 aaPredicted RBP9.23□□□□□ -0.93
NEDD9-201ENST00000379433 RALYQ9UKM9 306 aaKnown RBP9.23□□□□□ -0.93
NEDD9-201ENST00000379433 C5orf52A6NGY3 159 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 SIRPB1O00241 398 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 ST8SIA3O43173 380 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 RPLP1P05386 114 aaKnown RBP9.23□□□□□ -0.93
NEDD9-201ENST00000379433 TGFBR3Q03167 851 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 TMEM249Q2WGJ8 235 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 ABCA11PQ4W5N1 156 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 BTNL3Q6UXE8 466 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 OR5AP2Q8NGF4 316 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 SECTM1Q8WVN6 248 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 SMIM12Q96EX1 92 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 WBP1Q96G27 269 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 PRDM13Q9H4Q3 707 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 H0YL77 283 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 M0R143 59 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 IGLV3-1P01715 115 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 CPN1P15169 458 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 FAM214BQ7L5A3 538 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 C1QTNF5Q9BXJ0 243 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 LIME1Q9H400 295 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 ZDHHC11Q9H8X9 412 aa9.23□□□□□ -0.93
NEDD9-201ENST00000379433 ASH1LQ9NR48 2969 aaKnown RBP9.22□□□□□ -0.93
NEDD9-201ENST00000379433 MCRIP1C9JLW8 97 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 M0R036 132 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 SCGNO76038 276 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 H2AFB1P0C5Y9 115 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 CALCRP30988 508 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 ARR3P36575 388 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 TMUB2Q71RG4 321 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 SLC25A40Q8TBP6 338 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 PERPQ96FX8 193 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 ZNF75AQ96N20 296 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 ASCL2Q99929 193 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 GSX2Q9BZM3 304 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 RNF122Q9H9V4 155 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 SVEP1Q4LDE5 3571 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 TRAV25A0A0B4J276 109 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 FIGNL2A6NMB9 653 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 HIST1H1BP16401 226 aaKnown RBP9.22□□□□□ -0.93
NEDD9-201ENST00000379433 CFPP27918 469 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 ZNF83P51522 516 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 RAB11AP62491 216 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 GAMTQ14353 236 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 TBC1D28Q2M2D7 210 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 ANKRD55Q3KP44 614 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 MKXQ8IYA7 352 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 CISD2Q8N5K1 135 aaKnown RBP9.22□□□□□ -0.93
NEDD9-201ENST00000379433 UBAC2Q8NBM4 344 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 HSD17B11Q8NBQ5 300 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 DCUN1D4Q92564 292 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 COL25A1Q9BXS0 654 aaPredicted RBP9.22□□□□□ -0.93
NEDD9-201ENST00000379433 SMIM3Q9BZL3 60 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 KPTNQ9Y664 436 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 USF3Q68DE3 2245 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 DOCK11Q5JSL3 2073 aa9.22□□□□□ -0.93
NEDD9-201ENST00000379433 M0QXV9 152 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 MSTNO14793 375 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 RCC1P18754 421 aaPredicted RBP9.21□□□□□ -0.93
NEDD9-201ENST00000379433 ZBTB25P24278 435 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 LTC4SQ16873 150 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 AADACL3Q5VUY0 350 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 SLC25A42Q86VD7 318 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 SPICQ8N5J4 248 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 TPRX1Q8N7U7 411 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 OR13D1Q8NGV5 346 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 ANXA10Q9UJ72 324 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 SPG11Q96JI7 2443 aa9.21□□□□□ -0.93
NEDD9-201ENST00000379433 RPS10-NUDT3A0A1W2PQS6 291 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms