RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 SLC22A6Q4U2R8 563 aa13.73□□□□□ -0.21
PDLIM4-202ENST00000379018 SYT6Q5T7P8 510 aaPredicted RBP13.73□□□□□ -0.21
PDLIM4-202ENST00000379018 DDI2Q5TDH0 399 aa13.73□□□□□ -0.21
PDLIM4-202ENST00000379018 ZNF497Q6ZNH5 498 aa13.73□□□□□ -0.21
PDLIM4-202ENST00000379018 CHCHD6Q9BRQ6 235 aa13.73□□□□□ -0.21
PDLIM4-202ENST00000379018 JAM3Q9BX67 310 aa13.73□□□□□ -0.21
PDLIM4-202ENST00000379018 MRPL20Q9BYC9 149 aaKnown RBP13.73□□□□□ -0.21
PDLIM4-202ENST00000379018 IFT22Q9H7X7 185 aa13.73□□□□□ -0.21
PDLIM4-202ENST00000379018 ZNF580Q9UK33 172 aa13.73□□□□□ -0.21
PDLIM4-202ENST00000379018 CSMD3Q7Z407 3707 aa13.73□□□□□ -0.21
PDLIM4-202ENST00000379018 MAGEA13PA6NCF6 341 aa13.72□□□□□ -0.21
PDLIM4-202ENST00000379018 NBR2O15453 112 aa13.72□□□□□ -0.21
PDLIM4-202ENST00000379018 HBZP02008 142 aa13.72□□□□□ -0.21
PDLIM4-202ENST00000379018 OR8U9P0C7N5 309 aa13.72□□□□□ -0.21
PDLIM4-202ENST00000379018 VHLP40337 213 aa13.72□□□□□ -0.21
PDLIM4-202ENST00000379018 ZIK1Q3SY52 487 aaPredicted RBP13.72□□□□□ -0.21
PDLIM4-202ENST00000379018 ACSM6Q6P461 480 aa13.72□□□□□ -0.21
PDLIM4-202ENST00000379018 ORAI1Q96D31 301 aa13.72□□□□□ -0.21
PDLIM4-202ENST00000379018 TOLLIPQ9H0E2 274 aa13.72□□□□□ -0.21
PDLIM4-202ENST00000379018 EDA2RQ9HAV5 297 aa13.72□□□□□ -0.21
PDLIM4-202ENST00000379018 ETAA1Q9NY74 926 aa13.72□□□□□ -0.21
PDLIM4-202ENST00000379018 EXOGQ9Y2C4 368 aaKnown RBP13.72□□□□□ -0.21
PDLIM4-202ENST00000379018 LANCL1O43813 399 aa13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 HLA-DRB1P01911 266 aa13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 LGALS1P09382 135 aaKnown RBP13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 FCGR1AP12314 374 aa13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 ZNF93P35789 620 aaPredicted RBP13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 GTF2A1P52655 376 aaPredicted RBP13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 ZNF137PP52743 207 aa13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 GBX2P52951 348 aaPredicted RBP13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 PPP3R1P63098 170 aa13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 NDPQ00604 133 aa13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 GNMTQ14749 295 aa13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 Q3ZCU0 254 aa13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 ASCL4Q6XD76 172 aa13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 LINC00596Q86U02 117 aa13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 SGPP2Q8IWX5 399 aa13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 TRUB1Q8WWH5 349 aaKnown RBP13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 RGP1Q92546 391 aaPredicted RBP13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 AMBNQ9NP70 447 aa13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 OR2S2Q9NQN1 319 aa13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 CHCHD3Q9NX63 227 aaKnown RBP13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 KIAA1456Q9P272 454 aa13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 MRPS28Q9Y2Q9 187 aaKnown RBP13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 FBXO7Q9Y3I1 522 aa13.71□□□□□ -0.21
PDLIM4-202ENST00000379018 TNCP24821 2201 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 FAM90A10PA6NDY2 464 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 SNTNA6NMZ2 147 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 CD2P06729 351 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 ADARB1P78563 741 aaKnown RBP13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 C5orf64Q2M2E5 130 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 MPV17LQ2QL34 196 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 NHLRC3Q5JS37 347 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 C6orf183Q5T699 404 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 MEDAGQ5VYS4 303 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 LIN54Q6MZP7 749 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 ZNF529Q6P280 563 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 C5orf24Q7Z6I8 188 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 SYS1Q8N2H4 156 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 MS4A10Q96PG2 267 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 MYCBPQ99417 103 aaPredicted RBP13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 ABHD14AQ9BUJ0 271 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 RAB9BQ9NP90 201 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 IL36GQ9NZH8 169 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 ORC6Q9Y5N6 252 aa13.7□□□□□ -0.22
PDLIM4-202ENST00000379018 MCRIP1C9JLW8 97 aa13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 SOX15O60248 233 aa13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 GTF2F2P13984 249 aa13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 ARSBP15848 533 aa13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 RCC1P18754 421 aaPredicted RBP13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 PPP1CCP36873 323 aaKnown RBP13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 SNRPGP62308 76 aaKnown RBP13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 PLGLAQ15195 96 aa13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 LRRC36Q1X8D7 754 aa13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 C1orf146Q5VVC0 180 aa13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 MINDY2Q8NBR6 621 aa13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 OR52L2PQ8NGH6 319 aa13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 TMEM106AQ96A25 262 aa13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 CENPNQ96H22 339 aaPredicted RBP13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 TMEM138Q9NPI0 162 aa13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 PAK1IP1Q9NWT1 392 aaPredicted RBP13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 ERVK13-1Q9NX77 482 aa13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 FOXA2Q9Y261 457 aaPredicted RBP13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 ERGIC3Q9Y282 383 aa13.69□□□□□ -0.22
PDLIM4-202ENST00000379018 JTBO76095 146 aa13.68□□□□□ -0.22
PDLIM4-202ENST00000379018 BDKRB2P30411 391 aa13.68□□□□□ -0.22
PDLIM4-202ENST00000379018 OR3A3P47888 321 aa13.68□□□□□ -0.22
PDLIM4-202ENST00000379018 RAB12Q6IQ22 244 aa13.68□□□□□ -0.22
PDLIM4-202ENST00000379018 ANKRD13BQ86YJ7 626 aa13.68□□□□□ -0.22
PDLIM4-202ENST00000379018 GPR148Q8TDV2 347 aa13.68□□□□□ -0.22
PDLIM4-202ENST00000379018 CYYR1Q96J86 154 aa13.68□□□□□ -0.22
PDLIM4-202ENST00000379018 NABP2Q9BQ15 211 aa13.68□□□□□ -0.22
PDLIM4-202ENST00000379018 SPATA25Q9BR10 227 aa13.68□□□□□ -0.22
PDLIM4-202ENST00000379018 ELOVL1Q9BW60 279 aa13.68□□□□□ -0.22
PDLIM4-202ENST00000379018 CST11Q9H112 138 aa13.68□□□□□ -0.22
PDLIM4-202ENST00000379018 FBXL15Q9H469 300 aa13.68□□□□□ -0.22
PDLIM4-202ENST00000379018 HYDINQ4G0P3 5121 aa13.67□□□□□ -0.22
PDLIM4-202ENST00000379018 CIB2O75838 187 aa13.67□□□□□ -0.22
PDLIM4-202ENST00000379018 FADS2O95864 444 aaKnown RBP13.67□□□□□ -0.22
PDLIM4-202ENST00000379018 TPPP2P59282 170 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms