RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 MUC1P15941 1255 aaPredicted RBP11.68□□□□□ -0.54
HIPK3-202ENST00000379016 ASAH1Q13510 395 aa11.68□□□□□ -0.54
HIPK3-202ENST00000379016 ZNF714Q96N38 554 aa11.68□□□□□ -0.54
HIPK3-202ENST00000379016 FLRT3Q9NZU0 649 aa11.68□□□□□ -0.54
HIPK3-202ENST00000379016 NAV1Q8NEY1 1877 aa11.68□□□□□ -0.54
HIPK3-202ENST00000379016 HBZP02008 142 aa11.68□□□□□ -0.54
HIPK3-202ENST00000379016 DEFB121Q5J5C9 76 aa11.68□□□□□ -0.54
HIPK3-202ENST00000379016 TTC9CQ8N5M4 171 aa11.68□□□□□ -0.54
HIPK3-202ENST00000379016 GVQW1Q8N7I0 195 aa11.68□□□□□ -0.54
HIPK3-202ENST00000379016 C1orf162Q8NEQ5 155 aaPredicted RBP11.68□□□□□ -0.54
HIPK3-202ENST00000379016 WFDC5Q8TCV5 224 aa11.68□□□□□ -0.54
HIPK3-202ENST00000379016 SYT11Q9BT88 431 aa11.68□□□□□ -0.54
HIPK3-202ENST00000379016 INTS1Q8N201 2190 aaKnown RBP11.68□□□□□ -0.54
HIPK3-202ENST00000379016 TMEM129A0AVI4 362 aa11.68□□□□□ -0.54
HIPK3-202ENST00000379016 CLPSL1A2RUU4 121 aa11.68□□□□□ -0.54
HIPK3-202ENST00000379016 HIST1H1DP16402 221 aaKnown RBP11.68□□□□□ -0.54
HIPK3-202ENST00000379016 MPLP40238 635 aa11.68□□□□□ -0.54
HIPK3-202ENST00000379016 FAM209BQ5JX69 171 aa11.68□□□□□ -0.54
HIPK3-202ENST00000379016 DOCK7Q96N67 2140 aa11.68□□□□□ -0.54
HIPK3-202ENST00000379016 XRN1Q8IZH2 1706 aaKnown RBP11.67□□□□□ -0.54
HIPK3-202ENST00000379016 CDIPTO14735 213 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 NDUFA3O95167 84 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 SFT2D2O95562 160 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 CFDP00746 253 aaPredicted RBP11.67□□□□□ -0.54
HIPK3-202ENST00000379016 CRHP06850 196 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 TRIP6Q15654 476 aaKnown RBP11.67□□□□□ -0.54
HIPK3-202ENST00000379016 PRSS54Q6PEW0 395 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 PIMREGQ9BSJ6 248 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 RAB33BQ9H082 229 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 A0A1B0GWB2 263 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 EPPINO95925 133 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 CCR5P51681 352 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 NUTF2P61970 127 aaKnown RBP11.67□□□□□ -0.54
HIPK3-202ENST00000379016 PRNDQ9UKY0 176 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 RALGAPA1Q6GYQ0 2036 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 FOXB2Q5VYV0 432 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 C12orf54Q6X4T0 127 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 BIVMQ86UB2 503 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 SPSB4Q96A44 273 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 IGHV3-35A0A0C4DH35 117 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 A8MWL6 223 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 LEPROTL1O95214 131 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 PAX2Q02962 417 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 CXorf66Q5JRM2 361 aaPredicted RBP11.67□□□□□ -0.54
HIPK3-202ENST00000379016 NUBPLQ8TB37 319 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 ELSPBP1Q96BH3 223 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 MS4A4AQ96JQ5 239 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 TEX37Q96LM6 180 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 AKAP6Q13023 2319 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 REG1AP05451 166 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 TSPOP30536 169 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 EVX1P49640 407 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 ACVR1Q04771 509 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 LMO3Q8TAP4 145 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 RNF7Q9UBF6 113 aa11.67□□□□□ -0.54
HIPK3-202ENST00000379016 ATP5G2Q06055 141 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 KLF9Q13886 244 aaPredicted RBP11.66□□□□□ -0.54
HIPK3-202ENST00000379016 IGHV3-23P01764 117 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 SELENOPP49908 381 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 CYS1Q717R9 158 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 ZDHHC22Q8N966 263 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 CCL19Q99731 98 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 C1orf220Q5T0J3 134 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 OR6X1Q8NH79 312 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 APOBEC4Q8WW27 367 aaKnown RBP11.66□□□□□ -0.54
HIPK3-202ENST00000379016 PDLIM5Q96HC4 596 aaKnown RBP11.66□□□□□ -0.54
HIPK3-202ENST00000379016 MYO7AQ13402 2215 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 PHLPP1O60346 1717 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 EPHA8P29322 1005 aaPredicted RBP11.66□□□□□ -0.54
HIPK3-202ENST00000379016 PNRC1Q12796 327 aaPredicted RBP11.66□□□□□ -0.54
HIPK3-202ENST00000379016 SRSF5Q13243 272 aaKnown RBP11.66□□□□□ -0.54
HIPK3-202ENST00000379016 NUDT16L1Q9BRJ7 211 aaKnown RBP11.66□□□□□ -0.54
HIPK3-202ENST00000379016 REPIN1Q9BWE0 567 aaKnown RBP11.66□□□□□ -0.54
HIPK3-202ENST00000379016 CDC42EP3Q9UKI2 254 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 HOXD3P31249 432 aaPredicted RBP11.66□□□□□ -0.54
HIPK3-202ENST00000379016 S100A7L2Q5SY68 101 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 ANKRD37Q7Z713 158 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 WNT10AQ9GZT5 417 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 PARLQ9H300 379 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 TRBV20OR9-2A0A075B6H5 130 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 IGHV3-49A0A0A0MS15 119 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 A1L4Q6 167 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 MBPP02686 304 aaPredicted RBP11.66□□□□□ -0.54
HIPK3-202ENST00000379016 SRSF4Q08170 494 aaKnown RBP11.66□□□□□ -0.54
HIPK3-202ENST00000379016 PMS2CLQ68D20 193 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 ARRDC1Q8N5I2 433 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 OR8D4Q8NGM9 314 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 SRSF12Q8WXF0 261 aaKnown RBP11.66□□□□□ -0.54
HIPK3-202ENST00000379016 LINC01587Q99440 93 aa11.66□□□□□ -0.54
HIPK3-202ENST00000379016 SF3B6Q9Y3B4 125 aaKnown RBP11.66□□□□□ -0.54
HIPK3-202ENST00000379016 RPL31P62899 125 aaKnown RBP11.65□□□□□ -0.54
HIPK3-202ENST00000379016 EFNB1P98172 346 aa11.65□□□□□ -0.54
HIPK3-202ENST00000379016 RIMBP3CA6NJZ7 1639 aa11.65□□□□□ -0.54
HIPK3-202ENST00000379016 RIMBP3BA6NNM3 1639 aa11.65□□□□□ -0.54
HIPK3-202ENST00000379016 RIMBP3Q9UFD9 1639 aa11.65□□□□□ -0.54
HIPK3-202ENST00000379016 RRHO14718 337 aa11.65□□□□□ -0.54
HIPK3-202ENST00000379016 TNFSF10P50591 281 aa11.65□□□□□ -0.54
HIPK3-202ENST00000379016 Q6ZNX1 250 aa11.65□□□□□ -0.54
HIPK3-202ENST00000379016 SEC11BP0C7V7 166 aa11.65□□□□□ -0.54
HIPK3-202ENST00000379016 SRSF6Q13247 344 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms