RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 WDR25Q64LD2 544 aaPredicted RBP12.31□□□□□ -0.44
TRIM13-202ENST00000378182 CADM3Q8N126 398 aa12.31□□□□□ -0.44
TRIM13-202ENST00000378182 TEX29Q8N6K0 151 aa12.31□□□□□ -0.44
TRIM13-202ENST00000378182 MMP26Q9NRE1 261 aa12.31□□□□□ -0.44
TRIM13-202ENST00000378182 TMEM210A6NLX4 147 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 HLA-DRB3P79483 266 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 OR10D4PQ8NGN7 298 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 TMEM255AQ5JRV8 349 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 RIMKLAQ8IXN7 391 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 POM121Q96HA1 1249 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 PHLDA3Q9Y5J5 127 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 NUDT3O95989 172 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 RPLP1P05386 114 aaKnown RBP12.3□□□□□ -0.44
TRIM13-202ENST00000378182 GCSAMLQ5JQS6 135 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 ZNF880Q6PDB4 577 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 ZNF385AQ96PM9 386 aaKnown RBP12.3□□□□□ -0.44
TRIM13-202ENST00000378182 SCN7AQ01118 1682 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 A0A1W2PS18 150 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 DHRS2Q13268 280 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 LRRC75BQ2VPJ9 315 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 SHISA5Q8N114 240 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 C11orf44Q8N8P7 122 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 OR13C6PQ8NH95 151 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 SIAH2O43255 324 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 CTSSP25774 331 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 MAS1LP35410 378 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 SMAGPQ0VAQ4 97 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 KLRB1Q12918 225 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 CTF1Q16619 201 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 PAXXQ9BUH6 204 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 BRWD1Q9NSI6 2320 aa12.3□□□□□ -0.44
TRIM13-202ENST00000378182 IGHV3-49A0A0A0MS15 119 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 CEACAM18A8MTB9 384 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 APCSP02743 223 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 FCGR3AP08637 254 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 TMEM251Q8N6I4 163 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 TLNRD1Q9H1K6 362 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 RNF115Q9Y4L5 304 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 JUNBP17275 347 aaPredicted RBP12.29□□□□□ -0.44
TRIM13-202ENST00000378182 ZNF56Q15929 161 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 ST3GAL2Q16842 350 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 KLK15Q9H2R5 256 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 TMEFF2Q9UIK5 374 aaPredicted RBP12.29□□□□□ -0.44
TRIM13-202ENST00000378182 SSBP1Q04837 148 aaKnown RBP12.29□□□□□ -0.44
TRIM13-202ENST00000378182 HIST3H3Q16695 136 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 MRM1Q6IN84 353 aaKnown RBP12.29□□□□□ -0.44
TRIM13-202ENST00000378182 ADAD2Q8NCV1 583 aaKnown RBP12.29□□□□□ -0.44
TRIM13-202ENST00000378182 PPIAL4CA0A0B4J2A2 164 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 ADAP1O75689 374 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 FUCA1P04066 466 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 PPIAL4GP0DN37 164 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 IQCJQ1A5X6 159 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 TMEM183BQ1AE95 376 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 FAM106AQ4KMX7 169 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 C9orf40Q8IXQ3 194 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 MANBALQ9NQG1 85 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 IGHV3-48P01763 117 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 VN1R4Q7Z5H5 301 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 COX14Q96I36 57 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 NPFFO15130 113 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 FAM24BQ8N5W8 94 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 TMEM174Q8WUU8 243 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 DMRTA2Q96SC8 542 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 NEU1Q99519 415 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 SF3B5Q9BWJ5 86 aaKnown RBP12.29□□□□□ -0.44
TRIM13-202ENST00000378182 BET1LQ9NYM9 111 aa12.29□□□□□ -0.44
TRIM13-202ENST00000378182 TMEM189A5PLL7 270 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 UPK3AO75631 287 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 RPL24P83731 157 aaKnown RBP12.28□□□□□ -0.44
TRIM13-202ENST00000378182 DEFB121Q5J5C9 76 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 GSX2Q9BZM3 304 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 SLC52A3Q9NQ40 469 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 IL20Q9NYY1 176 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 S4R3C0 116 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 TMEM56-RWDD3S4R434 201 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 PROB1E7EW31 1015 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 SSTR5P35346 364 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 FRRS1LQ9P0K9 344 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 ATP6V1FQ16864 119 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 HSPB8Q9UJY1 196 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 IGHV3OR16-13A0A075B7E8 117 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 IGHV3-74A0A0B4J1X5 117 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 NPIPB6E9PJ23 425 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 ZNF770Q6IQ21 691 aaPredicted RBP12.28□□□□□ -0.44
TRIM13-202ENST00000378182 MARVELD3Q96A59 401 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 PRSS2P07478 247 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 HLA-DRB5Q30154 266 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 SMIM4Q8WVI0 70 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 YIPF6Q96EC8 236 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 RGPD3A6NKT7 1758 aaPredicted RBP12.28□□□□□ -0.44
TRIM13-202ENST00000378182 CDC42EP2O14613 210 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 CDCP2Q5VXM1 449 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 IL36RNQ9UBH0 155 aa12.28□□□□□ -0.44
TRIM13-202ENST00000378182 IL13RA2Q14627 380 aa12.27□□□□□ -0.44
TRIM13-202ENST00000378182 MEIG1Q5JSS6 88 aa12.27□□□□□ -0.44
TRIM13-202ENST00000378182 TEPPQ6URK8 271 aa12.27□□□□□ -0.44
TRIM13-202ENST00000378182 RPS4Y2Q8TD47 263 aa12.27□□□□□ -0.44
TRIM13-202ENST00000378182 ARAP2Q8WZ64 1704 aa12.27□□□□□ -0.44
TRIM13-202ENST00000378182 PAGE4O60829 102 aa12.27□□□□□ -0.44
TRIM13-202ENST00000378182 IER3P46695 156 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms