RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 ZXDCQ2QGD7 858 aaPredicted RBP10.26□□□□□ -0.77
NPHP4-202ENST00000378161 MUC21Q5SSG8 566 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 C9orf50Q5SZB4 431 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 GLIPR1L1Q6UWM5 242 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 BHLHA15Q7RTS1 189 aaPredicted RBP10.26□□□□□ -0.77
NPHP4-202ENST00000378161 ZNF257Q9Y2Q1 563 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 PPIAL4EA0A075B759 164 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 SPINK8P0C7L1 97 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 PPIAL4FP0DN26 164 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 FCRL6Q6DN72 434 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 ZNF793Q6ZN11 406 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 OR2Z1Q8NG97 314 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 DDIT4LQ96D03 193 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 PMCHL2Q9BQD1 86 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 SERGEFQ9UGK8 458 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 PROB1E7EW31 1015 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 NDUFB8O95169 186 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 ADMP35318 185 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 ZNF83P51522 516 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 THSD4Q6ZMP0 1018 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 Q6ZWC4 215 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 SAXO1Q8IYX7 474 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 TMEM45BQ96B21 275 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 C5orf30Q96GV9 206 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 COL25A1Q9BXS0 654 aaPredicted RBP10.26□□□□□ -0.77
NPHP4-202ENST00000378161 KLRC4-KLRK1H3BQV0 150 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 APOBEC1P41238 236 aaKnown RBP10.26□□□□□ -0.77
NPHP4-202ENST00000378161 ZNF117Q03924 483 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 DMWDQ09019 674 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 ACSF3Q4G176 576 aaPredicted RBP10.26□□□□□ -0.77
NPHP4-202ENST00000378161 CALHM1Q8IU99 346 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 PERPQ96FX8 193 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 GCM1Q9NP62 436 aa10.26□□□□□ -0.77
NPHP4-202ENST00000378161 GALR2O43603 387 aaPredicted RBP10.25□□□□□ -0.77
NPHP4-202ENST00000378161 RAC3P60763 192 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 PMP22Q01453 160 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 PSG3Q16557 428 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 LHX8Q68G74 356 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 VN1R3Q9BXE9 311 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 LINC00470Q9BZP3 86 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 COX5AP20674 150 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 GPR183P32249 361 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 OR1D4P47884 311 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 PLAURQ03405 335 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 TMEM164Q5U3C3 297 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 CCDC144NLQ6NUI1 221 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 SHISA2Q6UWI4 295 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 OR4C12Q96R67 309 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 CLEC1BQ9P126 229 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 TRAV36DV7A0A075B6V5 113 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 IGHV2-26A0A0B4J1V2 119 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 A0A1B0GTH9 108 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 H3BP45 60 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 PLPP3O14495 311 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 ATXN7O15265 892 aaPredicted RBP10.25□□□□□ -0.77
NPHP4-202ENST00000378161 DUX1O43812 170 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 MT-ATP6P00846 226 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 PDLIM4P50479 330 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 BRICD5Q6PL45 260 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 FAM57BQ71RH2 274 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 FAM169BQ8N8A8 192 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 OR8B3Q8NGG8 313 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 NECAP2Q9NVZ3 263 aa10.25□□□□□ -0.77
NPHP4-202ENST00000378161 PAPPA2Q9BXP8 1791 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 ALG1L2C9J202 215 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 LINC00869P0C866 280 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 FUT6P51993 359 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 RPL23P62829 140 aaKnown RBP10.24□□□□□ -0.77
NPHP4-202ENST00000378161 PAQR4Q8N4S7 273 aaPredicted RBP10.24□□□□□ -0.77
NPHP4-202ENST00000378161 C4orf45Q96LM5 186 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 ULBP2Q9BZM5 246 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 C5orf66Q9H5L9 145 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 PLEKHA3Q9HB20 300 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 PARP14Q460N5 1801 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 GBF1Q92538 1859 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 TMEM250H0YL14 139 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 P2RY10O00398 339 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 MPPED1O15442 326 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 FCER1GP30273 86 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 CLDN15P56746 228 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 HIST1H1AQ02539 215 aaPredicted RBP10.24□□□□□ -0.77
NPHP4-202ENST00000378161 PARM1Q6UWI2 310 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 PLXDC1Q8IUK5 500 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 MAP1LC3CQ9BXW4 147 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 DEFB126Q9BYW3 111 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 OBP2AQ9NY56 170 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 CACNA1GO43497 2377 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 FAM157AC9JC47 383 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 H0Y980 276 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 PFN1P07737 140 aaKnown RBP10.24□□□□□ -0.77
NPHP4-202ENST00000378161 CSRP2Q16527 193 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 ZFAND6Q6FIF0 208 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 OR2V2Q96R30 315 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 IGLC7A0M8Q6 106 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 EMP1P54849 157 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 NANOS3P60323 173 aaKnown RBP10.24□□□□□ -0.77
NPHP4-202ENST00000378161 C5orf64Q2M2E5 130 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 TIGITQ495A1 244 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 EMC4Q5J8M3 183 aa10.24□□□□□ -0.77
NPHP4-202ENST00000378161 NPEPL1Q8NDH3 523 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms