RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 Q6ZSR6 202 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 ST8SIA1Q92185 356 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 SLC25A22Q9H936 323 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 SLC39A9Q9NUM3 307 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 ST3GAL6Q9Y274 331 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 MED12Q93074 2177 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 ARHGAP21Q5T5U3 1957 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 C20orf202A1L168 122 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 F2Z2F3 143 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 EGR1P18146 543 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 PTTG1IPP53801 180 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 LCN2P80188 198 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 LEMD1Q68G75 181 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 TIPARPQ7Z3E1 657 aaKnown RBP13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 OR13H1Q8NG92 308 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 TMEM9BQ9NQ34 198 aa13.39□□□□□ -0.27
CSNK1A1-202ENST00000377843 TRBV11-1A0A0K0K1C0 115 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 SLC22A20A6NK97 555 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 SEC16AO15027 2179 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 CDKN1BP46527 198 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 Q6ZSR3 168 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 CIB3Q96Q77 187 aaPredicted RBP13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 OR4C12Q96R67 309 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 PLSCR2Q9NRY7 297 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 DUXBA0A1W2PPF3 345 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 AQP7O14520 342 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 SCTP09683 121 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 RNPS1Q15287 305 aaKnown RBP13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 HIST3H3Q16695 136 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 PHYHD1Q5SRE7 291 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 ACSM6Q6P461 480 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 KCNIP4Q6PIL6 250 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 LYG1Q8N1E2 194 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 OSR2Q8N2R0 312 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 WDR61Q9GZS3 305 aaKnown RBP13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 FRYLO94915 3013 aa13.38□□□□□ -0.27
CSNK1A1-202ENST00000377843 KIR2DS5A0A0G2JLQ3 304 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 A0A0G2JNG1 304 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 A0A1W2PQF6 199 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 KIR2DS3K7RE56 304 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 SERF1AO75920 110 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 SERF2P84101 59 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 KIR2DS5Q14953 304 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 THAP3Q8WTV1 239 aaPredicted RBP13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 ZNF442Q9H7R0 627 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 FBRSQ9HAH7 460 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 PATZ1Q9HBE1 687 aaKnown RBP13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 LOC105371242A0A075B767 164 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 VSTM2BA6NLU5 285 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 B4DGG1 531 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 PDCD6O75340 191 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 OR5G3P0C626 314 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 PSMB3P49720 205 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 NSDHLQ15738 373 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 Q8N976 141 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 OR10V1Q8NGI7 309 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 OR1K1Q8NGR3 316 aa13.37□□□□□ -0.27
CSNK1A1-202ENST00000377843 IGHV3-20A0A0C4DH32 117 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 IGHV5-51A0A0C4DH38 117 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 PGPEP1LA6NFU8 196 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 MLNRO43193 412 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 C1QTNF9P0C862 333 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 DEFA4P12838 97 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 GFERP55789 205 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 PPP1CBP62140 327 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 RANP62826 216 aaKnown RBP13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 ASCL4Q6XD76 172 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 ZNF114Q8NC26 417 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 OR5D13Q8NGL4 314 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 SDK1Q7Z5N4 2213 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 H3BMH7 237 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 M0R135 149 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 LHX2P50458 406 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 TPPP2P59282 170 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 RABEPKQ7Z6M1 372 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 LINC01551Q86U37 167 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 SPSB1Q96BD6 273 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 ZNF501Q96CX3 271 aaPredicted RBP13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 ZNF799Q96GE5 643 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 SOHLH2Q9NX45 425 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 ELOVL5Q9NYP7 299 aa13.36□□□□□ -0.27
CSNK1A1-202ENST00000377843 UBE2L5PA0A1B0GUS4 154 aa13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 PAGE4O60829 102 aa13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 EPHA8P29322 1005 aaPredicted RBP13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 CTRLP40313 264 aa13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 MALLQ13021 153 aa13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 TMEM211Q6ICI0 200 aa13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 WDR5BQ86VZ2 330 aa13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 TAF15Q92804 592 aaKnown RBP eCLIP13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 RAB40CQ96S21 281 aa13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 PSENENQ9NZ42 101 aa13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 FBXL7Q9UJT9 491 aa13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 IGKV1-6A0A0C4DH72 117 aa13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 PGLYRP1O75594 196 aaPredicted RBP13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 TNFP01375 233 aa13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 BMP5P22003 454 aa13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 OTX1P32242 354 aaPredicted RBP13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 OR8B8Q15620 311 aa13.35□□□□□ -0.27
CSNK1A1-202ENST00000377843 ZNF709Q8N972 641 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms