RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 DUXBA0A1W2PPF3 345 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 LIPT2A6NK58 231 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 TCF21O43680 179 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 LANCL1O43813 399 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 IGHA1P01876 353 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 NRN1LQ496H8 165 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 C6orf201Q7Z4U5 140 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 FAAP24Q9BTP7 215 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 NAA60Q9H7X0 242 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 HILPDAQ9Y5L2 63 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 CEP350Q5VT06 3117 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 ZNF318Q5VUA4 2279 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 GNG7O60262 68 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 IL13RA2Q14627 380 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 DHRS11Q6UWP2 260 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 PILRAQ9UKJ1 303 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 IGHV3OR16-10A0A075B7F0 116 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 M0QZK8 103 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 CDIPTO14735 213 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 GGCTO75223 188 aaKnown RBP9.43□□□□□ -0.9
HIF3A-205ENST00000377670 RPL31P62899 125 aaKnown RBP9.43□□□□□ -0.9
HIF3A-205ENST00000377670 NEIL1Q96FI4 390 aaPredicted RBP9.43□□□□□ -0.9
HIF3A-205ENST00000377670 NAT8Q9UHE5 227 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 SPTAN1Q13813 2472 aaKnown RBP9.43□□□□□ -0.9
HIF3A-205ENST00000377670 MDC1Q14676 2089 aaKnown RBP9.43□□□□□ -0.9
HIF3A-205ENST00000377670 ACACAQ13085 2346 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 B9A039 149 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 PGA3P0DJD8 388 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 OR3A1P47881 315 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 DYNLT3P51808 116 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 SLC25A1P53007 311 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 FUT5Q11128 374 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 KISS1Q15726 138 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 RRN3P1Q2M238 152 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 LBHQ53QV2 105 aaPredicted RBP9.43□□□□□ -0.9
HIF3A-205ENST00000377670 SPINK9Q5DT21 86 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 DPPA3Q6W0C5 159 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 ZPLD1Q8TCW7 415 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 OPN4Q9UHM6 478 aa9.43□□□□□ -0.9
HIF3A-205ENST00000377670 MGAMO43451 1857 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 CDRT15L2A8MXV6 281 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 M0R2Z0 102 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 CTDSPLO15194 276 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 PCOLCEQ15113 449 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 TUSC1Q2TAM9 212 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 P2RX4Q99571 388 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 CNTD2Q9H8S5 307 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 PARP11Q9NR21 331 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 NYNRINQ9P2P1 1898 aaKnown RBP9.42□□□□□ -0.9
HIF3A-205ENST00000377670 HAND1O96004 215 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 OR2T10Q8NGZ9 312 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 CHAC2Q8WUX2 184 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 SIGLEC5O15389 551 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 CRISP2P16562 243 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 IL11P20809 199 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 OR10G4Q8NGN3 311 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 OR10G9Q8NGN4 311 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 OR10G7Q8NGN6 311 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 OR2H1Q9GZK4 316 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 ZDHHC8Q9ULC8 765 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 FUT9Q9Y231 359 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 PATJQ8NI35 1801 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 CENPFP49454 3210 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 CACNA1HO95180 2353 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 LOC105371242A0A075B767 164 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 A0A1W2PR77 199 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 TMEM210A6NLX4 147 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 CRHP06850 196 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 ERGP11308 486 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 BSXQ3C1V8 233 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 MESTQ5EB52 335 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 LAMTOR1Q6IAA8 161 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 FAM219AQ8IW50 185 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 ZNF519Q8TB69 540 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 FAM57AQ8TBR7 257 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 RAB40CQ96S21 281 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 COL25A1Q9BXS0 654 aaPredicted RBP9.42□□□□□ -0.9
HIF3A-205ENST00000377670 ELF5Q9UKW6 265 aaPredicted RBP9.42□□□□□ -0.9
HIF3A-205ENST00000377670 HSF4Q9ULV5 492 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 AUP1Q9Y679 476 aa9.42□□□□□ -0.9
HIF3A-205ENST00000377670 ZNF207O43670 478 aaKnown RBP9.41□□□□□ -0.9
HIF3A-205ENST00000377670 CXorf66Q5JRM2 361 aaPredicted RBP9.41□□□□□ -0.9
HIF3A-205ENST00000377670 SLC25A42Q86VD7 318 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 OR10C1Q96KK4 312 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 RALGAPA2Q2PPJ7 1873 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 GATCO43716 136 aaKnown RBP9.41□□□□□ -0.9
HIF3A-205ENST00000377670 ZNF880Q6PDB4 577 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 CLEC18BQ6UXF7 455 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 PPP1R32Q7Z5V6 425 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 ZNF721Q8TF20 911 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 RBM14Q96PK6 669 aaKnown RBP9.41□□□□□ -0.9
HIF3A-205ENST00000377670 OR10J1P30954 320 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 CDC34P49427 236 aaPredicted RBP9.41□□□□□ -0.9
HIF3A-205ENST00000377670 PPOXP50336 477 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 PLAURQ03405 335 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 TBR1Q16650 682 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 CD300LDQ6UXZ3 194 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 ATG4DQ86TL0 474 aaPredicted RBP9.41□□□□□ -0.9
HIF3A-205ENST00000377670 OR10A7Q8NGE5 316 aa9.41□□□□□ -0.9
HIF3A-205ENST00000377670 A0A0G2JMZ2 1700 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms