RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 LINC00052Q96N35 136 aa15.46■□□□□ 0.07
CLSTN1-202ENST00000377298 IFT22Q9H7X7 185 aa15.46■□□□□ 0.07
CLSTN1-202ENST00000377298 SLC25A22Q9H936 323 aa15.46■□□□□ 0.07
CLSTN1-202ENST00000377298 OTOFQ9HC10 1997 aa15.46■□□□□ 0.07
CLSTN1-202ENST00000377298 SNAI3Q3KNW1 292 aa15.46■□□□□ 0.07
CLSTN1-202ENST00000377298 KLF14Q8TD94 323 aaPredicted RBP15.46■□□□□ 0.07
CLSTN1-202ENST00000377298 OPN4Q9UHM6 478 aa15.46■□□□□ 0.07
CLSTN1-202ENST00000377298 MMP24Q9Y5R2 645 aa15.46■□□□□ 0.07
CLSTN1-202ENST00000377298 SEMA7AO75326 666 aa15.46■□□□□ 0.06
CLSTN1-202ENST00000377298 MMDQ15546 238 aa15.46■□□□□ 0.06
CLSTN1-202ENST00000377298 LGALSLQ3ZCW2 172 aaPredicted RBP15.46■□□□□ 0.06
CLSTN1-202ENST00000377298 FAM209AQ5JX71 171 aa15.46■□□□□ 0.06
CLSTN1-202ENST00000377298 LYZL2Q7Z4W2 148 aa15.46■□□□□ 0.06
CLSTN1-202ENST00000377298 DOK5Q9P104 306 aa15.46■□□□□ 0.06
CLSTN1-202ENST00000377298 KCNK7Q9Y2U2 307 aa15.46■□□□□ 0.06
CLSTN1-202ENST00000377298 ARID1AO14497 2285 aa15.46■□□□□ 0.06
CLSTN1-202ENST00000377298 ZNF737O75373 536 aa15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 TOX4O94842 621 aa15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 SPP1P10451 314 aa15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 G6PCP35575 357 aa15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 TMEM167BQ9NRX6 74 aa15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 TECRQ9NZ01 308 aaKnown RBP15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 POMT1Q9Y6A1 747 aa15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 DICER1Q9UPY3 1922 aaKnown RBP15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 NKX2-6A6NCS4 301 aa15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 SULT1A1P50225 295 aa15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 ADAD2Q8NCV1 583 aaKnown RBP15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 GAR1Q9NY12 217 aaKnown RBP15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 HBZP02008 142 aa15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 HPXP02790 462 aa15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 PSG2P11465 335 aa15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 OR5R1Q8NH85 324 aa15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 ZNRF4Q8WWF5 429 aa15.45■□□□□ 0.06
CLSTN1-202ENST00000377298 GDF9O60383 454 aa15.44■□□□□ 0.06
CLSTN1-202ENST00000377298 HPRT1P00492 218 aa15.44■□□□□ 0.06
CLSTN1-202ENST00000377298 CKAP5Q14008 2032 aa15.44■□□□□ 0.06
CLSTN1-202ENST00000377298 WDR31Q8NA23 367 aa15.44■□□□□ 0.06
CLSTN1-202ENST00000377298 ABCA7Q8IZY2 2146 aa15.44■□□□□ 0.06
CLSTN1-202ENST00000377298 TPRX1Q8N7U7 411 aa15.44■□□□□ 0.06
CLSTN1-202ENST00000377298 SLC35B3Q9H1N7 401 aa15.44■□□□□ 0.06
CLSTN1-202ENST00000377298 ZDHHC11Q9H8X9 412 aa15.44■□□□□ 0.06
CLSTN1-202ENST00000377298 G6PC2Q9NQR9 355 aa15.44■□□□□ 0.06
CLSTN1-202ENST00000377298 TMEM50BP56557 158 aa15.44■□□□□ 0.06
CLSTN1-202ENST00000377298 TMEM241Q24JQ0 296 aa15.44■□□□□ 0.06
CLSTN1-202ENST00000377298 PLAC9Q5JTB6 97 aa15.44■□□□□ 0.06
CLSTN1-202ENST00000377298 ZNF826PQ6ZT77 177 aa15.44■□□□□ 0.06
CLSTN1-202ENST00000377298 BLNKQ8WV28 456 aa15.44■□□□□ 0.06
CLSTN1-202ENST00000377298 SCMH1Q96GD3 660 aa15.44■□□□□ 0.06
CLSTN1-202ENST00000377298 C17orf51A8MQB3 221 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 HLA-DQB1P01920 261 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 TNFSF10P50591 281 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 ZNF705AQ6ZN79 300 aaPredicted RBP15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 TCTEX1D1Q8N7M0 179 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 OR1B1Q8NGR6 318 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 A0A1W2PP11 408 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 LOC390937A0A1W2PQ73 354 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 SEC14L6B5MCN3 397 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 NPY1RP25929 384 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 GNG4P50150 75 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 UBE2L3P68036 154 aaKnown RBP15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 UNQ9370/PRO34162Q6UXP9 181 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 VSIG4Q9Y279 399 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 LOC102723996A0A087X1L8 192 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 KLF4O43474 513 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 GAPDHP04406 335 aaKnown RBP15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 MC5RP33032 325 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 ZFP36L1Q07352 338 aaKnown RBP15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 ZNF66Q6ZN08 573 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 Q8WTZ3 238 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 PIKFYVEQ9Y2I7 2098 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 SLC31A2O15432 143 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 SYNGR3O43761 229 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 UMODP07911 640 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 NAAAQ02083 359 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 MYPOPQ86VE0 399 aaPredicted RBP15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 HSF4Q9ULV5 492 aa15.43■□□□□ 0.06
CLSTN1-202ENST00000377298 J3QR06 171 aa15.42■□□□□ 0.06
CLSTN1-202ENST00000377298 NTF3P20783 257 aa15.42■□□□□ 0.06
CLSTN1-202ENST00000377298 ZNF154Q13106 437 aa15.42■□□□□ 0.06
CLSTN1-202ENST00000377298 MRPS18CQ9Y3D5 142 aaKnown RBP15.42■□□□□ 0.06
CLSTN1-202ENST00000377298 CACNA1EQ15878 2313 aa15.42■□□□□ 0.06
CLSTN1-202ENST00000377298 CLEC12BQ2HXU8 276 aa15.42■□□□□ 0.06
CLSTN1-202ENST00000377298 TIMM23BQ5SRD1 257 aa15.42■□□□□ 0.06
CLSTN1-202ENST00000377298 BVESQ8NE79 360 aa15.42■□□□□ 0.06
CLSTN1-202ENST00000377298 FLVCR1-AS1Q8TAF5 88 aa15.42■□□□□ 0.06
CLSTN1-202ENST00000377298 CHAC2Q8WUX2 184 aa15.42■□□□□ 0.06
CLSTN1-202ENST00000377298 TRAF4Q9BUZ4 470 aaPredicted RBP15.42■□□□□ 0.06
CLSTN1-202ENST00000377298 CLCF1Q9UBD9 225 aa15.42■□□□□ 0.06
CLSTN1-202ENST00000377298 A0A1W2PPE3 182 aa15.42■□□□□ 0.06
CLSTN1-202ENST00000377298 MRGPRGQ86SM5 289 aa15.42■□□□□ 0.06
CLSTN1-202ENST00000377298 PDPNQ86YL7 162 aa15.42■□□□□ 0.06
CLSTN1-202ENST00000377298 FADS6Q8N9I5 356 aa15.42■□□□□ 0.06
CLSTN1-202ENST00000377298 ZIC3O60481 467 aa15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 SUCLG1P53597 346 aaKnown RBP15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 LMX1BO60663 402 aa15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 TBX6O95947 436 aaPredicted RBP15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 THY1P04216 161 aa15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 EWSR1Q01844 656 aaKnown RBP eCLIP15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 CHODLQ9H9P2 273 aa15.41■□□□□ 0.06
CLSTN1-202ENST00000377298 CLEC5AQ9NY25 188 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms