RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 IGKV1D-43A0A0B4J1Z2 117 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 EFNA2O43921 213 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 ZFAND5O76080 213 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 BRI3O95415 125 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 HSPB1P04792 205 aaKnown RBP13.36□□□□□ -0.27
FXN-201ENST00000377270 CLEC3BP05452 202 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 PF4V1P10720 104 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 MLF1P58340 268 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 CLEC12BQ2HXU8 276 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 HLA-BQ31612 363 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 TMEM41BQ5BJD5 291 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 AMMECR1LQ6DCA0 310 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 Q7L0L9 218 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 MRGPRGQ86SM5 289 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 LYPD6Q86Y78 171 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 TGIF2LYQ8IUE0 185 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 EMC6Q9BV81 110 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 METTL7AQ9H8H3 244 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 AKIRIN1Q9H9L7 192 aaPredicted RBP13.36□□□□□ -0.27
FXN-201ENST00000377270 RHBDD3Q9Y3P4 386 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 PFN1P07737 140 aaKnown RBP13.36□□□□□ -0.27
FXN-201ENST00000377270 FAM3BP58499 235 aaPredicted RBP13.36□□□□□ -0.27
FXN-201ENST00000377270 UNC119Q13432 240 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 TMEM156Q8N614 296 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 OR10G3Q8NGC4 313 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 IMMP2LQ96T52 175 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 KCNK17Q96T54 332 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 PLK3Q9H4B4 646 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 HIF1ANQ9NWT6 349 aa13.36□□□□□ -0.27
FXN-201ENST00000377270 CFAP54Q96N23 3096 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 IGHV1-69-2A0A0G2JMI3 117 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 LIPT2A6NK58 231 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 SUMO1P63165 101 aaKnown RBP13.35□□□□□ -0.27
FXN-201ENST00000377270 ZFP36L1Q07352 338 aaKnown RBP13.35□□□□□ -0.27
FXN-201ENST00000377270 FER1L6-AS1Q8NA97 138 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 CENPMQ9NSP4 180 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 OCIAD1Q9NX40 245 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 R4GMQ9 66 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 ARID1AO14497 2285 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 EXPH5Q8NEV8 1989 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 FIGNL2A6NMB9 653 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 K7N7A8 449 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 RBMXL2O75526 392 aaKnown RBP13.35□□□□□ -0.27
FXN-201ENST00000377270 HERV-K104P63124 156 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 KIF26BQ2KJY2 2108 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 TMEM177Q53S58 311 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 SPSB3Q6PJ21 355 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 OR2I1PQ8NGU4 316 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 OR2V2Q96R30 315 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 TMEM38BQ9NVV0 291 aa13.35□□□□□ -0.27
FXN-201ENST00000377270 MAP1LC3B2A6NCE7 125 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 GABRA2P47869 451 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 P2RY1P47900 373 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 GFRA1P56159 465 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 UBE2NP61088 152 aaKnown RBP13.34□□□□□ -0.27
FXN-201ENST00000377270 PNRC1Q12796 327 aaPredicted RBP13.34□□□□□ -0.27
FXN-201ENST00000377270 PLPPR5Q32ZL2 321 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 COMMD2Q86X83 199 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.34□□□□□ -0.27
FXN-201ENST00000377270 SPSB1Q96BD6 273 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 MAP1LC3BQ9GZQ8 125 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 GTSF1LQ9H1H1 148 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 LILRA1O75019 489 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 SRSF10O75494 262 aaKnown RBP13.34□□□□□ -0.27
FXN-201ENST00000377270 SERPINA7P05543 415 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 TSPOP30536 169 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 PTGER4P35408 488 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 PTGDSP41222 190 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 MYBPHQ13203 477 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 RTN4RL2Q86UN3 420 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 OR4P4Q8NGL7 312 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 CMTM2Q8TAZ6 248 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 RNF138Q8WVD3 245 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 HSPB9Q9BQS6 159 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 CTDSP1Q9GZU7 261 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 ALKBH4Q9NXW9 302 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 KIAA1456Q9P272 454 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 HHLA2Q9UM44 414 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 B3GALT5Q9Y2C3 310 aa13.34□□□□□ -0.27
FXN-201ENST00000377270 LSM5Q9Y4Y9 91 aaKnown RBP13.34□□□□□ -0.27
FXN-201ENST00000377270 VPS13AQ96RL7 3174 aa13.33□□□□□ -0.27
FXN-201ENST00000377270 OR2T8A6NH00 312 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 ESDP10768 282 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 CCNOP22674 350 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 SRPXP78539 464 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 QRFPP83859 136 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 RAB31Q13636 194 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 PCK2Q16822 640 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 FAM71F2Q6NXP2 309 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 VASH2Q86V25 355 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 HINT2Q9BX68 163 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 DEFB126Q9BYW3 111 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 C12orf49Q9H741 205 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 C19orf25Q9UFG5 118 aaPredicted RBP13.33□□□□□ -0.28
FXN-201ENST00000377270 TUBD1Q9UJT1 453 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 RALGAPA1Q6GYQ0 2036 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 LOC107986453A0A1B0GWG9 222 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 CFIP05156 583 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 H2BFMP0C1H6 154 aa13.33□□□□□ -0.28
FXN-201ENST00000377270 VSIG8P0DPA2 414 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms