RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 NUP214P35658 2090 aaPredicted RBP11.79□□□□□ -0.52
GPC6-201ENST00000377047 A0A1B0GU03 582 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 C11orf94C9JXX5 98 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 IFNL4K9M1U5 179 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 MPV17P39210 176 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 KHDC3LQ587J8 217 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 KCNK17Q96T54 332 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 FUT5Q11128 374 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 TEPPQ6URK8 271 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 HIGD1AQ9Y241 93 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 P01737 135 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 SNAI3Q3KNW1 292 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 MOGAT2Q3SYC2 334 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 SPSB2Q99619 263 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 ZNF426Q9BUY5 554 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 GHITMQ9H3K2 345 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 CYB5R1Q9UHQ9 305 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 HPRT1P00492 218 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 RPL27AP46776 148 aaKnown RBP11.79□□□□□ -0.52
GPC6-201ENST00000377047 TCL1AP56279 114 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 HOGA1Q86XE5 327 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 GUCD1Q96NT3 240 aa11.79□□□□□ -0.52
GPC6-201ENST00000377047 PARP14Q460N5 1801 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 IGHV3OR16-10A0A075B7F0 116 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 CD40P25942 277 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 B2MP61769 119 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 RNFT1Q5M7Z0 435 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 SNX22Q96L94 193 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 MARVELD1Q9BSK0 173 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 KLK13Q9UKR3 277 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 PPIAL4CA0A0B4J2A2 164 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 PPIAL4GP0DN37 164 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 RCC2Q9P258 522 aaKnown RBP11.78□□□□□ -0.52
GPC6-201ENST00000377047 MIOXQ9UGB7 285 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 CDRT15L2A8MXV6 281 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 SCGB1C2P0DMR2 95 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 G0S2P27469 103 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 COL8A1P27658 744 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 TMEM105Q8N8V8 129 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 SCARF2Q96GP6 870 aaPredicted RBP11.78□□□□□ -0.52
GPC6-201ENST00000377047 CLDN34H7C241 214 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 GDF9O60383 454 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 RNF224P0DH78 156 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 LTBRP36941 435 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 EWSR1Q01844 656 aaKnown RBP eCLIP11.78□□□□□ -0.52
GPC6-201ENST00000377047 TMEM91Q6ZNR0 172 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 KLF14Q8TD94 323 aaPredicted RBP11.78□□□□□ -0.52
GPC6-201ENST00000377047 WNK3Q9BYP7 1800 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 RBFOX3A6NFN3 312 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 CSN3P07498 182 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 FAM157CP0CG43 387 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 SULT1A1P50225 295 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 ARF6P62330 175 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 ZNF273Q14593 569 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 IGSF11Q5DX21 431 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 SIRT7Q9NRC8 400 aa11.78□□□□□ -0.52
GPC6-201ENST00000377047 KIF13BQ9NQT8 1826 aa11.77□□□□□ -0.52
GPC6-201ENST00000377047 TEX50A0A1B0GTY4 177 aa11.77□□□□□ -0.52
GPC6-201ENST00000377047 IGSF23A1L1A6 192 aa11.77□□□□□ -0.52
GPC6-201ENST00000377047 TMEM229AB2RXF0 380 aa11.77□□□□□ -0.52
GPC6-201ENST00000377047 HOXB1P14653 301 aaPredicted RBP11.77□□□□□ -0.52
GPC6-201ENST00000377047 TMEM97Q5BJF2 176 aa11.77□□□□□ -0.52
GPC6-201ENST00000377047 TIMP4Q99727 224 aa11.77□□□□□ -0.52
GPC6-201ENST00000377047 LOC105371242A0A075B767 164 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 SIGLEC12Q96PQ1 595 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 ZNF107Q9UII5 783 aaPredicted RBP11.77□□□□□ -0.53
GPC6-201ENST00000377047 UNC13CQ8NB66 2214 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 LEUTXA8MZ59 168 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 NDUFA2O43678 99 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 CRHP06850 196 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 ZNF883P0CG24 379 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 SMIM10L1P0DMW3 83 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 MC5RP33032 325 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 UNQ5815/PRO19632Q6UWF5 114 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 KLHDC1Q8N7A1 406 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 SMIM10Q96HG1 83 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 PRDM14Q9GZV8 571 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 NXF2Q9GZY0 626 aaKnown RBP11.77□□□□□ -0.53
GPC6-201ENST00000377047 MIXL1Q9H2W2 232 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 ELOVL5Q9NYP7 299 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 V9GYH0 126 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 LIMS1P48059 325 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 ERVS71-1P61550 626 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 CLLU1Q5K131 121 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 FDX2Q6P4F2 183 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 C19orf35Q6ZS72 473 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 MUC15Q8N387 334 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 SRD5A3Q9H8P0 318 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 IDI2-AS1Q9NZ38 188 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 IGHV1-69-2A0A0G2JMI3 117 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 USF1P22415 310 aaPredicted RBP11.77□□□□□ -0.53
GPC6-201ENST00000377047 ROM1Q03395 351 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 SLC25A53Q5H9E4 307 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 SOSTQ9BQB4 213 aa11.77□□□□□ -0.53
GPC6-201ENST00000377047 DHRS7CA6NNS2 312 aa11.76□□□□□ -0.53
GPC6-201ENST00000377047 TDRD6O60522 2096 aaKnown RBP11.76□□□□□ -0.53
GPC6-201ENST00000377047 SBF2Q86WG5 1849 aa11.76□□□□□ -0.53
GPC6-201ENST00000377047 EBLN2Q6P2I7 272 aa11.76□□□□□ -0.53
GPC6-201ENST00000377047 TMEM116Q8NCL8 245 aa11.76□□□□□ -0.53
GPC6-201ENST00000377047 KLF9Q13886 244 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms