RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 SBK3P0C264 359 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 FAM109BQ6ICB4 259 aaPredicted RBP10.98□□□□□ -0.65
VPS13A-204ENST00000376634 ZNF441Q8N8Z8 693 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 GEMIN2O14893 280 aaKnown RBP10.98□□□□□ -0.65
VPS13A-204ENST00000376634 CTLA4P16410 223 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 HOXA6P31267 233 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 FOXB2Q5VYV0 432 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 SLC23A3Q6PIS1 610 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 DPH3Q96FX2 82 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 TMEM255AQ5JRV8 349 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 NCMAPQ5T1S8 102 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 GPBAR1Q8TDU6 330 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 P2RX4Q99571 388 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 RHNO1Q9BSD3 238 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 OR2W1Q9Y3N9 320 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 LRP5O75197 1615 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 OTOGLQ3ZCN5 2332 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 IGHV5-51A0A0C4DH38 117 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 SURF2Q15527 256 aaPredicted RBP10.98□□□□□ -0.65
VPS13A-204ENST00000376634 ZNF793Q6ZN11 406 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 DEFB124Q8NES8 71 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 WDFY2Q96P53 400 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 SHANK3Q9BYB0 1731 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 SIPA1L1O43166 1804 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 CXorf51AA0A1B0GTR3 108 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 HES3Q5TGS1 186 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 C16orf92Q96LL3 132 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 A0A1B0GU03 582 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 CTSDP07339 412 aaPredicted RBP10.98□□□□□ -0.65
VPS13A-204ENST00000376634 KIAA1549Q9HCM3 1950 aa10.98□□□□□ -0.65
VPS13A-204ENST00000376634 C1orf210Q8IVY1 113 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 RND1Q92730 232 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 NCOA6Q14686 2063 aaPredicted RBP10.97□□□□□ -0.65
VPS13A-204ENST00000376634 HOXC4P09017 264 aaPredicted RBP10.97□□□□□ -0.65
VPS13A-204ENST00000376634 ZNF735P0CB33 412 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 CCR2P41597 374 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 CDX2Q99626 313 aaPredicted RBP10.97□□□□□ -0.65
VPS13A-204ENST00000376634 RLFQ13129 1914 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 KIF26AQ9ULI4 1882 aaPredicted RBP10.97□□□□□ -0.65
VPS13A-204ENST00000376634 SLC35B1P78383 322 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 SPATA45Q537H7 98 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 TEPPQ6URK8 271 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 MRGPRFQ96AM1 343 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 HEXA-AS1Q9H8Q6 139 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 PHLDA3Q9Y5J5 127 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 COMPP49747 757 aaPredicted RBP10.97□□□□□ -0.65
VPS13A-204ENST00000376634 PARP11Q9NR21 331 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 CLN8Q9UBY8 286 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 METTL12A8MUP2 240 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 NPIPB6E9PJ23 425 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 JOSD1Q15040 202 aaPredicted RBP10.97□□□□□ -0.65
VPS13A-204ENST00000376634 PRICKLE4Q2TBC4 344 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 TIMP4Q99727 224 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 SLC25A10Q9UBX3 287 aaPredicted RBP10.97□□□□□ -0.65
VPS13A-204ENST00000376634 PTPN13Q12923 2485 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 K7N7A8 449 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 RAB29O14966 203 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 FAM3BP58499 235 aaPredicted RBP10.97□□□□□ -0.65
VPS13A-204ENST00000376634 SMUG1Q53HV7 270 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 TCRBV5S1A1TA0A578 114 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 ARL6IP6Q8N6S5 226 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 TRAF4Q9BUZ4 470 aaPredicted RBP10.97□□□□□ -0.65
VPS13A-204ENST00000376634 MALRD1Q5VYJ5 2156 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 GALNSP34059 522 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 WFDC3Q8IUB2 231 aa10.97□□□□□ -0.65
VPS13A-204ENST00000376634 KCNE1BA0A087WTH5 132 aa10.96□□□□□ -0.65
VPS13A-204ENST00000376634 IGLV3-25P01717 112 aa10.96□□□□□ -0.65
VPS13A-204ENST00000376634 ZNF770Q6IQ21 691 aaPredicted RBP10.96□□□□□ -0.65
VPS13A-204ENST00000376634 LRRC75AQ8NAA5 344 aa10.96□□□□□ -0.65
VPS13A-204ENST00000376634 SLIRPQ9GZT3 109 aaKnown RBP10.96□□□□□ -0.65
VPS13A-204ENST00000376634 POLR2GP62487 172 aaKnown RBP eCLIP10.96□□□□□ -0.65
VPS13A-204ENST00000376634 NEURL2Q9BR09 285 aa10.96□□□□□ -0.65
VPS13A-204ENST00000376634 CHST1O43916 411 aa10.96□□□□□ -0.65
VPS13A-204ENST00000376634 PITX3O75364 302 aa10.96□□□□□ -0.65
VPS13A-204ENST00000376634 A0A1W2PRD5 423 aa10.96□□□□□ -0.65
VPS13A-204ENST00000376634 A0A1W2PRF3 423 aa10.96□□□□□ -0.65
VPS13A-204ENST00000376634 A0A1W2PRM7 423 aa10.96□□□□□ -0.65
VPS13A-204ENST00000376634 ZNF205O95201 554 aa10.96□□□□□ -0.65
VPS13A-204ENST00000376634 GAPTQ8N292 157 aa10.96□□□□□ -0.65
VPS13A-204ENST00000376634 OR1K1Q8NGR3 316 aa10.96□□□□□ -0.65
VPS13A-204ENST00000376634 EXOGQ9Y2C4 368 aaKnown RBP10.96□□□□□ -0.65
VPS13A-204ENST00000376634 MUC4Q99102 2169 aa10.96□□□□□ -0.66
VPS13A-204ENST00000376634 TNFSF14O43557 240 aa10.96□□□□□ -0.66
VPS13A-204ENST00000376634 NAAAQ02083 359 aa10.96□□□□□ -0.66
VPS13A-204ENST00000376634 CT55Q8WUE5 264 aa10.96□□□□□ -0.66
VPS13A-204ENST00000376634 LINC01565O15544 149 aa10.96□□□□□ -0.66
VPS13A-204ENST00000376634 ZNF137PP52743 207 aa10.96□□□□□ -0.66
VPS13A-204ENST00000376634 MMDQ15546 238 aa10.96□□□□□ -0.66
VPS13A-204ENST00000376634 LGALSLQ3ZCW2 172 aaPredicted RBP10.96□□□□□ -0.66
VPS13A-204ENST00000376634 GVQW1Q8N7I0 195 aa10.96□□□□□ -0.66
VPS13A-204ENST00000376634 OIT3Q8WWZ8 545 aa10.96□□□□□ -0.66
VPS13A-204ENST00000376634 PAXXQ9BUH6 204 aa10.96□□□□□ -0.66
VPS13A-204ENST00000376634 SONP18583 2426 aaKnown RBP10.96□□□□□ -0.66
VPS13A-204ENST00000376634 IGHV3OR15-7A0A075B7D8 119 aa10.96□□□□□ -0.66
VPS13A-204ENST00000376634 SNURFLB1AK76 121 aa10.96□□□□□ -0.66
VPS13A-204ENST00000376634 SYNGR1O43759 233 aa10.96□□□□□ -0.66
VPS13A-204ENST00000376634 RNFT1Q5M7Z0 435 aa10.96□□□□□ -0.66
VPS13A-204ENST00000376634 OR4A5Q8NH83 315 aa10.96□□□□□ -0.66
VPS13A-204ENST00000376634 NUBPLQ8TB37 319 aa10.96□□□□□ -0.66
VPS13A-204ENST00000376634 ABHD3Q8WU67 409 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms