RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 ZNF16P17020 682 aaPredicted RBP10.5□□□□□ -0.73
CLCN6-206ENST00000376496 LINC00205P59089 165 aa10.5□□□□□ -0.73
CLCN6-206ENST00000376496 TMEM268Q5VZI3 342 aa10.5□□□□□ -0.73
CLCN6-206ENST00000376496 LIAT1Q6ZQX7 453 aa10.5□□□□□ -0.73
CLCN6-206ENST00000376496 SLC35G3Q8N808 338 aa10.5□□□□□ -0.73
CLCN6-206ENST00000376496 GALNT11Q8NCW6 608 aa10.5□□□□□ -0.73
CLCN6-206ENST00000376496 RNF126Q9BV68 326 aa10.5□□□□□ -0.73
CLCN6-206ENST00000376496 SHPKQ9UHJ6 478 aa10.5□□□□□ -0.73
CLCN6-206ENST00000376496 RNF115Q9Y4L5 304 aa10.5□□□□□ -0.73
CLCN6-206ENST00000376496 PGLYRP1O75594 196 aaPredicted RBP10.49□□□□□ -0.73
CLCN6-206ENST00000376496 NXPH3O95157 252 aa10.49□□□□□ -0.73
CLCN6-206ENST00000376496 PSMB6P28072 239 aa10.49□□□□□ -0.73
CLCN6-206ENST00000376496 TFF3Q07654 80 aa10.49□□□□□ -0.73
CLCN6-206ENST00000376496 ZNF808Q8N4W9 903 aaPredicted RBP10.49□□□□□ -0.73
CLCN6-206ENST00000376496 CCDC71LQ8N9Z2 235 aa10.49□□□□□ -0.73
CLCN6-206ENST00000376496 GALMQ96C23 342 aa10.49□□□□□ -0.73
CLCN6-206ENST00000376496 RBMXL1Q96E39 390 aaKnown RBP10.49□□□□□ -0.73
CLCN6-206ENST00000376496 RRNAD1Q96FB5 475 aaKnown RBP10.49□□□□□ -0.73
CLCN6-206ENST00000376496 GALNT14Q96FL9 552 aa10.49□□□□□ -0.73
CLCN6-206ENST00000376496 VRK1Q99986 396 aaPredicted RBP10.49□□□□□ -0.73
CLCN6-206ENST00000376496 OR2S2Q9NQN1 319 aa10.49□□□□□ -0.73
CLCN6-206ENST00000376496 YLPM1P49750 1951 aaKnown RBP10.49□□□□□ -0.73
CLCN6-206ENST00000376496 ODAMA1E959 279 aa10.49□□□□□ -0.73
CLCN6-206ENST00000376496 OOEPA6NGQ2 149 aa10.49□□□□□ -0.73
CLCN6-206ENST00000376496 IRF2P14316 349 aa10.49□□□□□ -0.73
CLCN6-206ENST00000376496 ERVFRD-1P60508 538 aa10.49□□□□□ -0.73
CLCN6-206ENST00000376496 IZUMO4Q1ZYL8 232 aa10.49□□□□□ -0.73
CLCN6-206ENST00000376496 THAP6Q8TBB0 222 aa10.49□□□□□ -0.73
CLCN6-206ENST00000376496 DCUN1D4Q92564 292 aa10.49□□□□□ -0.73
CLCN6-206ENST00000376496 LEAP2Q969E1 77 aa10.49□□□□□ -0.73
CLCN6-206ENST00000376496 C2orf50Q96LR7 162 aa10.49□□□□□ -0.73
CLCN6-206ENST00000376496 HCFC1P51610 2035 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 USF3Q68DE3 2245 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 RNF222A6NCQ9 220 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 HMSDA8MTL9 139 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 B8ZZF3 427 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 K7N7A8 449 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 LY6HO94772 140 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 RPA2P15927 270 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 HTR2BP41595 481 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 LUMP51884 338 aaPredicted RBP10.48□□□□□ -0.73
CLCN6-206ENST00000376496 OR2B11Q5JQS5 317 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 C1QTNF12Q5T7M4 302 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 STUMQ69YW2 141 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 TEX261Q6UWH6 196 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 OR52M1Q8NGK5 317 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 GAFA1Q96PS6 74 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 U3KQ87 197 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 MSGN1A6NI15 193 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 TMPRSS2O15393 492 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 PRB1P04280 392 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 APOBEC3AP31941 199 aaPredicted RBP10.48□□□□□ -0.73
CLCN6-206ENST00000376496 S100A11P31949 105 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 BTNL3Q6UXE8 466 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 ZNF680Q8NEM1 530 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 C5orf30Q96GV9 206 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 C18orf12Q96KH6 178 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 SNX22Q96L94 193 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 NMES1Q9C002 83 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 TNFSF18Q9UNG2 199 aa10.48□□□□□ -0.73
CLCN6-206ENST00000376496 LSM5Q9Y4Y9 91 aaKnown RBP10.48□□□□□ -0.73
CLCN6-206ENST00000376496 TNFRSF1AP19438 455 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 EXOSC2Q13868 293 aaKnown RBP10.47□□□□□ -0.73
CLCN6-206ENST00000376496 CMTM1Q8IZ96 169 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 FAM222BQ8WU58 562 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 ABHD14BQ96IU4 210 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 SUCNR1Q9BXA5 334 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 TMEM222Q9H0R3 208 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 OR2D2Q9H210 308 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 EPG5Q9HCE0 2579 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 A0A1W2PPE3 182 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 C15orf65H3BRN8 121 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 MGST3O14880 152 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 ST8SIA5O15466 376 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 IFNA21P01568 189 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 FGL1Q08830 312 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 LYPD2Q6UXB3 125 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 LGI3Q8N145 548 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 DRAM1Q8N682 238 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 OR1S1Q8NH92 325 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 FLNCQ14315 2725 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 TMEM8BA6NDV4 472 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 VSTM5A8MXK1 200 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 FCN3O75636 299 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 SPDEFO95238 335 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 LOXP28300 417 aaPredicted RBP10.47□□□□□ -0.73
CLCN6-206ENST00000376496 IL15RAQ13261 267 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 CLEC9AQ6UXN8 241 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 MUC15Q8N387 334 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 Q8TCH9 128 aa10.47□□□□□ -0.73
CLCN6-206ENST00000376496 NPIPB11E5RHQ5 1161 aa10.46□□□□□ -0.73
CLCN6-206ENST00000376496 C19orf84I3L1E1 186 aa10.46□□□□□ -0.73
CLCN6-206ENST00000376496 P2RX3P56373 397 aa10.46□□□□□ -0.73
CLCN6-206ENST00000376496 ALKAL2Q6UX46 152 aa10.46□□□□□ -0.73
CLCN6-206ENST00000376496 SSX8Q7RTT4 187 aa10.46□□□□□ -0.73
CLCN6-206ENST00000376496 ZNF695Q8IW36 515 aa10.46□□□□□ -0.73
CLCN6-206ENST00000376496 SELENOHQ8IZQ5 122 aaKnown RBP10.46□□□□□ -0.73
CLCN6-206ENST00000376496 EGLN1Q9GZT9 426 aa10.46□□□□□ -0.73
CLCN6-206ENST00000376496 PSG11Q9UQ72 335 aa10.46□□□□□ -0.73
CLCN6-206ENST00000376496 CD55P08174 381 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms