RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 WIPF2Q8TF74 440 aaPredicted RBP11.37□□□□□ -0.59
CLCN6-203ENST00000376490 LPAR5Q9H1C0 372 aa11.37□□□□□ -0.59
CLCN6-203ENST00000376490 MMP27Q9H306 513 aa11.37□□□□□ -0.59
CLCN6-203ENST00000376490 Q9H521 79 aa11.37□□□□□ -0.59
CLCN6-203ENST00000376490 KCNIP1Q9NZI2 227 aa11.37□□□□□ -0.59
CLCN6-203ENST00000376490 GNG12Q9UBI6 72 aa11.37□□□□□ -0.59
CLCN6-203ENST00000376490 V9GY05 133 aa11.37□□□□□ -0.59
CLCN6-203ENST00000376490 IGHV1-3A0A0C4DH29 117 aa11.36□□□□□ -0.59
CLCN6-203ENST00000376490 SHISA3A0PJX4 238 aa11.36□□□□□ -0.59
CLCN6-203ENST00000376490 MRPS14O60783 128 aaKnown RBP11.36□□□□□ -0.59
CLCN6-203ENST00000376490 ZNF816Q0VGE8 651 aaPredicted RBP11.36□□□□□ -0.59
CLCN6-203ENST00000376490 C2orf68Q2NKX9 166 aa11.36□□□□□ -0.59
CLCN6-203ENST00000376490 C2orf76Q3KRA6 126 aa11.36□□□□□ -0.59
CLCN6-203ENST00000376490 MORN2Q502X0 79 aa11.36□□□□□ -0.59
CLCN6-203ENST00000376490 SLC25A48Q6ZT89 311 aaKnown RBP11.36□□□□□ -0.59
CLCN6-203ENST00000376490 OR2W3Q7Z3T1 314 aa11.36□□□□□ -0.59
CLCN6-203ENST00000376490 SPARTQ8N0X7 666 aa11.36□□□□□ -0.59
CLCN6-203ENST00000376490 FAM89BQ8N5H3 189 aa11.36□□□□□ -0.59
CLCN6-203ENST00000376490 ST6GALNAC6Q969X2 333 aa11.36□□□□□ -0.59
CLCN6-203ENST00000376490 RAB9BQ9NP90 201 aa11.36□□□□□ -0.59
CLCN6-203ENST00000376490 OR2S2Q9NQN1 319 aa11.36□□□□□ -0.59
CLCN6-203ENST00000376490 PLEKHJ1Q9NW61 149 aa11.36□□□□□ -0.59
CLCN6-203ENST00000376490 NDUFB11Q9NX14 153 aa11.36□□□□□ -0.59
CLCN6-203ENST00000376490 LRRC42Q9Y546 428 aa11.36□□□□□ -0.59
CLCN6-203ENST00000376490 IGHV3-72A0A0B4J1Y9 119 aa11.35□□□□□ -0.59
CLCN6-203ENST00000376490 TRDV1A0A1B0GX56 115 aa11.35□□□□□ -0.59
CLCN6-203ENST00000376490 FBXO24O75426 580 aa11.35□□□□□ -0.59
CLCN6-203ENST00000376490 IGKV1D-33P01593 117 aa11.35□□□□□ -0.59
CLCN6-203ENST00000376490 IGKV1-33P01594 117 aa11.35□□□□□ -0.59
CLCN6-203ENST00000376490 TMEM11P17152 192 aa11.35□□□□□ -0.59
CLCN6-203ENST00000376490 GNMTQ14749 295 aa11.35□□□□□ -0.59
CLCN6-203ENST00000376490 Q3ZCU0 254 aa11.35□□□□□ -0.59
CLCN6-203ENST00000376490 C9orf152Q5JTZ5 239 aa11.35□□□□□ -0.59
CLCN6-203ENST00000376490 HES5Q5TA89 166 aa11.35□□□□□ -0.59
CLCN6-203ENST00000376490 UBE2UQ5VVX9 321 aa11.35□□□□□ -0.59
CLCN6-203ENST00000376490 CD200R1LQ6Q8B3 271 aa11.35□□□□□ -0.59
CLCN6-203ENST00000376490 Q6ZPA2 131 aa11.35□□□□□ -0.59
CLCN6-203ENST00000376490 CENPVQ7Z7K6 275 aaPredicted RBP11.35□□□□□ -0.59
CLCN6-203ENST00000376490 SVOPQ8N4V2 548 aa11.35□□□□□ -0.59
CLCN6-203ENST00000376490 FAM3DQ96BQ1 224 aa11.35□□□□□ -0.59
CLCN6-203ENST00000376490 RBMXL1Q96E39 390 aaKnown RBP11.35□□□□□ -0.59
CLCN6-203ENST00000376490 URM1Q9BTM9 101 aaKnown RBP11.35□□□□□ -0.59
CLCN6-203ENST00000376490 YTHDF1Q9BYJ9 559 aaKnown RBP11.35□□□□□ -0.59
CLCN6-203ENST00000376490 CMYA5Q8N3K9 4069 aa11.35□□□□□ -0.59
CLCN6-203ENST00000376490 TRAV1-2A0A0B4J238 106 aa11.34□□□□□ -0.59
CLCN6-203ENST00000376490 NAPSAO96009 420 aa11.34□□□□□ -0.59
CLCN6-203ENST00000376490 IL3RAP26951 378 aa11.34□□□□□ -0.59
CLCN6-203ENST00000376490 PPP1CCP36873 323 aaKnown RBP11.34□□□□□ -0.59
CLCN6-203ENST00000376490 VEGFCP49767 419 aa11.34□□□□□ -0.59
CLCN6-203ENST00000376490 PSMD7P51665 324 aa11.34□□□□□ -0.59
CLCN6-203ENST00000376490 TMEM50BP56557 158 aa11.34□□□□□ -0.59
CLCN6-203ENST00000376490 OR10A3P58181 314 aa11.34□□□□□ -0.59
CLCN6-203ENST00000376490 PLA2G7Q13093 441 aa11.34□□□□□ -0.59
CLCN6-203ENST00000376490 EBI3Q14213 229 aa11.34□□□□□ -0.59
CLCN6-203ENST00000376490 NSUN5P1Q3KNT7 163 aa11.34□□□□□ -0.59
CLCN6-203ENST00000376490 TMEM30BQ3MIR4 351 aa11.34□□□□□ -0.59
CLCN6-203ENST00000376490 ZNF554Q86TJ5 538 aa11.34□□□□□ -0.59
CLCN6-203ENST00000376490 OR5AU1Q8NGC0 362 aa11.34□□□□□ -0.59
CLCN6-203ENST00000376490 RTN4IP1Q8WWV3 396 aaPredicted RBP11.34□□□□□ -0.59
CLCN6-203ENST00000376490 CITED2Q99967 270 aaPredicted RBP11.34□□□□□ -0.59
CLCN6-203ENST00000376490 AK3Q9UIJ7 227 aa11.34□□□□□ -0.59
CLCN6-203ENST00000376490 MOB4Q9Y3A3 225 aa11.34□□□□□ -0.59
CLCN6-203ENST00000376490 RRP15Q9Y3B9 282 aaKnown RBP11.34□□□□□ -0.59
CLCN6-203ENST00000376490 FOXI3A8MTJ6 420 aaPredicted RBP11.33□□□□□ -0.6
CLCN6-203ENST00000376490 ZNF736B4DX44 427 aaPredicted RBP11.33□□□□□ -0.6
CLCN6-203ENST00000376490 M0QZK8 103 aa11.33□□□□□ -0.6
CLCN6-203ENST00000376490 PDCD5O14737 125 aa11.33□□□□□ -0.6
CLCN6-203ENST00000376490 LDLRAD4O15165 306 aa11.33□□□□□ -0.6
CLCN6-203ENST00000376490 PSMB9P28065 219 aa11.33□□□□□ -0.6
CLCN6-203ENST00000376490 HTD2P86397 168 aa11.33□□□□□ -0.6
CLCN6-203ENST00000376490 HMGN3Q15651 99 aa11.33□□□□□ -0.6
CLCN6-203ENST00000376490 STEAP3Q658P3 488 aa11.33□□□□□ -0.6
CLCN6-203ENST00000376490 C22orf42Q6IC83 251 aa11.33□□□□□ -0.6
CLCN6-203ENST00000376490 ZNF880Q6PDB4 577 aa11.33□□□□□ -0.6
CLCN6-203ENST00000376490 SETD6Q8TBK2 473 aa11.33□□□□□ -0.6
CLCN6-203ENST00000376490 GALMQ96C23 342 aa11.33□□□□□ -0.6
CLCN6-203ENST00000376490 ARHGAP5-AS1Q96IT6 56 aa11.33□□□□□ -0.6
CLCN6-203ENST00000376490 EAF1Q96JC9 268 aaPredicted RBP11.33□□□□□ -0.6
CLCN6-203ENST00000376490 HDHD3Q9BSH5 251 aaPredicted RBP11.33□□□□□ -0.6
CLCN6-203ENST00000376490 CHMP1AQ9HD42 196 aaPredicted RBP11.33□□□□□ -0.6
CLCN6-203ENST00000376490 STEAP1Q9UHE8 339 aa11.33□□□□□ -0.6
CLCN6-203ENST00000376490 TMEM272A0A1B0GTI8 110 aa11.32□□□□□ -0.6
CLCN6-203ENST00000376490 ADARB2-AS1A8MUL3 147 aa11.32□□□□□ -0.6
CLCN6-203ENST00000376490 YPEL1O60688 119 aa11.32□□□□□ -0.6
CLCN6-203ENST00000376490 CD1BP29016 333 aa11.32□□□□□ -0.6
CLCN6-203ENST00000376490 ZNF137PP52743 207 aa11.32□□□□□ -0.6
CLCN6-203ENST00000376490 C10orf99Q6UWK7 81 aa11.32□□□□□ -0.6
CLCN6-203ENST00000376490 TGIF2LXQ8IUE1 241 aa11.32□□□□□ -0.6
CLCN6-203ENST00000376490 C5orf56Q8N8D9 126 aa11.32□□□□□ -0.6
CLCN6-203ENST00000376490 OR2T10Q8NGZ9 312 aa11.32□□□□□ -0.6
CLCN6-203ENST00000376490 IL1F10Q8WWZ1 152 aa11.32□□□□□ -0.6
CLCN6-203ENST00000376490 YPEL2Q96QA6 119 aa11.32□□□□□ -0.6
CLCN6-203ENST00000376490 PECRQ9BY49 303 aa11.32□□□□□ -0.6
CLCN6-203ENST00000376490 ABRACLQ9P1F3 81 aa11.32□□□□□ -0.6
CLCN6-203ENST00000376490 JPT1Q9UK76 154 aa11.32□□□□□ -0.6
CLCN6-203ENST00000376490 RAB22AQ9UL26 194 aa11.32□□□□□ -0.6
CLCN6-203ENST00000376490 HSF4Q9ULV5 492 aa11.32□□□□□ -0.6
CLCN6-203ENST00000376490 SMIM30A4D0T7 59 aa11.31□□□□□ -0.6
CLCN6-203ENST00000376490 IFITM5A6NNB3 132 aa11.31□□□□□ -0.6
CLCN6-203ENST00000376490 NCBP2LA6PVI3 153 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms