RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 TRAT1Q6PIZ9 186 aa12.81□□□□□ -0.36
C11orf88-202ENST00000375618 LINC00311Q8N616 119 aa12.81□□□□□ -0.36
C11orf88-202ENST00000375618 C8orf31Q8N9H6 132 aa12.81□□□□□ -0.36
C11orf88-202ENST00000375618 OR10R2Q8NGX6 335 aa12.81□□□□□ -0.36
C11orf88-202ENST00000375618 OR4F5Q8NH21 305 aa12.81□□□□□ -0.36
C11orf88-202ENST00000375618 SETD6Q8TBK2 473 aa12.81□□□□□ -0.36
C11orf88-202ENST00000375618 CFHR4Q92496 578 aa12.81□□□□□ -0.36
C11orf88-202ENST00000375618 TOMM40LQ969M1 308 aa12.81□□□□□ -0.36
C11orf88-202ENST00000375618 ST6GALNAC6Q969X2 333 aa12.81□□□□□ -0.36
C11orf88-202ENST00000375618 RAB3CQ96E17 227 aa12.81□□□□□ -0.36
C11orf88-202ENST00000375618 NAA50Q9GZZ1 169 aaKnown RBP12.81□□□□□ -0.36
C11orf88-202ENST00000375618 PARP12Q9H0J9 701 aaKnown RBP12.81□□□□□ -0.36
C11orf88-202ENST00000375618 CHMP1AQ9HD42 196 aaPredicted RBP12.81□□□□□ -0.36
C11orf88-202ENST00000375618 GNG12Q9UBI6 72 aa12.81□□□□□ -0.36
C11orf88-202ENST00000375618 GNB3P16520 340 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 RPS19P39019 145 aaKnown RBP12.8□□□□□ -0.36
C11orf88-202ENST00000375618 REG1BP48304 166 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 NCS1P62166 190 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 MORN2Q502X0 79 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 Q6ZS46 218 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 SLC25A48Q6ZT89 311 aaKnown RBP12.8□□□□□ -0.36
C11orf88-202ENST00000375618 ZNF554Q86TJ5 538 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 C3orf56Q8N813 242 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 PTX4Q96A99 478 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 RPEQ96AT9 228 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 SLC25A38Q96DW6 304 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 ZNF747Q9BV97 191 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 ATG5Q9H1Y0 275 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 C16orf95Q9H693 158 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 Q9N2K0 584 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 C12orf4Q9NQ89 552 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 OR2S2Q9NQN1 319 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 ABCB10Q9NRK6 738 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 KCNIP1Q9NZI2 227 aa12.8□□□□□ -0.36
C11orf88-202ENST00000375618 AMMECR1Q9Y4X0 333 aaPredicted RBP12.8□□□□□ -0.36
C11orf88-202ENST00000375618 A0A075B6Q4 140 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 IGKV1-6A0A0C4DH72 117 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 CLPSL1A2RUU4 121 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 TIMM23O14925 209 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 SCTP09683 121 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 HIST1H1DP16402 221 aaKnown RBP12.79□□□□□ -0.36
C11orf88-202ENST00000375618 CEACAM3P40198 252 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 PROK1P58294 105 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 MADCAM1Q13477 382 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 IDNKQ5T6J7 187 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 DRAM1Q8N682 238 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 OR10X1Q8NGY0 326 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 WFDC12Q8WWY7 111 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 CREB3L1Q96BA8 519 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 CMSS1Q9BQ75 279 aaKnown RBP12.79□□□□□ -0.36
C11orf88-202ENST00000375618 OCSTAMPQ9BR26 566 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 ZNF702PQ9H963 129 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 BEX1Q9HBH7 125 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 OR1A1Q9P1Q5 309 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 JPT1Q9UK76 154 aa12.79□□□□□ -0.36
C11orf88-202ENST00000375618 FAM90A9PA6NNJ1 464 aa12.78□□□□□ -0.36
C11orf88-202ENST00000375618 OOSP1A8MZH6 123 aa12.78□□□□□ -0.36
C11orf88-202ENST00000375618 HSD17B6O14756 317 aa12.78□□□□□ -0.36
C11orf88-202ENST00000375618 RANBP1P43487 201 aa12.78□□□□□ -0.36
C11orf88-202ENST00000375618 HLA-DRB3P79483 266 aa12.78□□□□□ -0.36
C11orf88-202ENST00000375618 HTD2P86397 168 aa12.78□□□□□ -0.36
C11orf88-202ENST00000375618 HABP2Q14520 560 aaPredicted RBP12.78□□□□□ -0.36
C11orf88-202ENST00000375618 TMEM30BQ3MIR4 351 aa12.78□□□□□ -0.36
C11orf88-202ENST00000375618 TIMM50Q3ZCQ8 353 aa12.78□□□□□ -0.36
C11orf88-202ENST00000375618 Q3ZCU0 254 aa12.78□□□□□ -0.36
C11orf88-202ENST00000375618 LIAT1Q6ZQX7 453 aa12.78□□□□□ -0.36
C11orf88-202ENST00000375618 MOB1BQ7L9L4 216 aa12.78□□□□□ -0.36
C11orf88-202ENST00000375618 ODF3L1Q8IXM7 274 aa12.78□□□□□ -0.36
C11orf88-202ENST00000375618 OR56B4Q8NH76 319 aa12.78□□□□□ -0.36
C11orf88-202ENST00000375618 IL1F10Q8WWZ1 152 aa12.78□□□□□ -0.36
C11orf88-202ENST00000375618 GALMQ96C23 342 aa12.78□□□□□ -0.36
C11orf88-202ENST00000375618 RIMS4Q9H426 269 aaPredicted RBP12.78□□□□□ -0.36
C11orf88-202ENST00000375618 RNF114Q9Y508 228 aa12.78□□□□□ -0.36
C11orf88-202ENST00000375618 IGHV3-72A0A0B4J1Y9 119 aa12.77□□□□□ -0.37
C11orf88-202ENST00000375618 POM121CA8CG34 1229 aa12.77□□□□□ -0.37
C11orf88-202ENST00000375618 YPEL1O60688 119 aa12.77□□□□□ -0.37
C11orf88-202ENST00000375618 TFAP2AP05549 437 aa12.77□□□□□ -0.37
C11orf88-202ENST00000375618 SNRNP70P08621 437 aaKnown RBP12.77□□□□□ -0.37
C11orf88-202ENST00000375618 FCGR3AP08637 254 aa12.77□□□□□ -0.37
C11orf88-202ENST00000375618 ALDH3B2P48448 385 aa12.77□□□□□ -0.37
C11orf88-202ENST00000375618 ZNF137PP52743 207 aa12.77□□□□□ -0.37
C11orf88-202ENST00000375618 VBP1P61758 197 aa12.77□□□□□ -0.37
C11orf88-202ENST00000375618 BLCAPP62952 87 aa12.77□□□□□ -0.37
C11orf88-202ENST00000375618 ZNF816Q0VGE8 651 aaPredicted RBP12.77□□□□□ -0.37
C11orf88-202ENST00000375618 HERPUD1Q15011 391 aa12.77□□□□□ -0.37
C11orf88-202ENST00000375618 MAFIPQ8WZ33 124 aa12.77□□□□□ -0.37
C11orf88-202ENST00000375618 YPEL2Q96QA6 119 aa12.77□□□□□ -0.37
C11orf88-202ENST00000375618 MRPS26Q9BYN8 205 aaKnown RBP12.77□□□□□ -0.37
C11orf88-202ENST00000375618 RAB9BQ9NP90 201 aa12.77□□□□□ -0.37
C11orf88-202ENST00000375618 RHBDL2Q9NX52 303 aa12.77□□□□□ -0.37
C11orf88-202ENST00000375618 ZNF230Q9UIE0 474 aaPredicted RBP12.77□□□□□ -0.37
C11orf88-202ENST00000375618 IGKV1D-8A0A087WSZ0 117 aa12.76□□□□□ -0.37
C11orf88-202ENST00000375618 IGHV1-3A0A0C4DH29 117 aa12.76□□□□□ -0.37
C11orf88-202ENST00000375618 METTL21EPA6NDL7 271 aa12.76□□□□□ -0.37
C11orf88-202ENST00000375618 SH2D7A6NKC9 451 aaPredicted RBP12.76□□□□□ -0.37
C11orf88-202ENST00000375618 ZNF736B4DX44 427 aaPredicted RBP12.76□□□□□ -0.37
C11orf88-202ENST00000375618 AMY1AP04745 511 aa12.76□□□□□ -0.37
C11orf88-202ENST00000375618 AMY2AP04746 511 aa12.76□□□□□ -0.37
C11orf88-202ENST00000375618 CD3GP09693 182 aa12.76□□□□□ -0.37
C11orf88-202ENST00000375618 BRS3P32247 399 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms