RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 ZNF552Q9H707 407 aaPredicted RBP10.46□□□□□ -0.73
C9orf3-203ENST00000375315 CHD3Q12873 2000 aaKnown RBP10.46□□□□□ -0.74
C9orf3-203ENST00000375315 CDS2O95674 445 aa10.46□□□□□ -0.74
C9orf3-203ENST00000375315 SRP14P37108 136 aaKnown RBP10.46□□□□□ -0.74
C9orf3-203ENST00000375315 PAFAH1B2P68402 229 aa10.46□□□□□ -0.74
C9orf3-203ENST00000375315 LINC00696Q6ZRV3 163 aa10.46□□□□□ -0.74
C9orf3-203ENST00000375315 RNF144BQ7Z419 303 aa10.46□□□□□ -0.74
C9orf3-203ENST00000375315 CENPVQ7Z7K6 275 aaPredicted RBP10.46□□□□□ -0.74
C9orf3-203ENST00000375315 MRGPRGQ86SM5 289 aa10.46□□□□□ -0.74
C9orf3-203ENST00000375315 COMMD2Q86X83 199 aa10.46□□□□□ -0.74
C9orf3-203ENST00000375315 TMEM256Q8N2U0 113 aa10.46□□□□□ -0.74
C9orf3-203ENST00000375315 BTF3L4Q96K17 158 aa10.46□□□□□ -0.74
C9orf3-203ENST00000375315 FAM206AQ9NX38 181 aa10.46□□□□□ -0.74
C9orf3-203ENST00000375315 MSTNO14793 375 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 CST7O76096 145 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 ONECUT2O95948 504 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 MMDQ15546 238 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 TDRG1Q3Y452 100 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 TPTE2P1Q5T6R2 138 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 DNM1P34Q6PK57 102 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 LCN15Q6UWW0 184 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 LYG1Q8N1E2 194 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 TMEM217Q8N7C4 229 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 OR5L1Q8NGL2 311 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 SPIN2AQ99865 258 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 SPIN2BQ9BPZ2 258 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 LRFN3Q9BTN0 628 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 NDUFB8O95169 186 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 IFNA5P01569 189 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 GLI4P10075 376 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 MRPS34P82930 218 aaKnown RBP10.45□□□□□ -0.74
C9orf3-203ENST00000375315 SGCBQ16585 318 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 PHLDA2Q53GA4 152 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 TSPO2Q5TGU0 170 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 OR5AS1Q8N127 324 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 MSI2Q96DH6 328 aaKnown RBP10.45□□□□□ -0.74
C9orf3-203ENST00000375315 C11orf1Q9H5F2 150 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 TRAPPC1Q9Y5R8 145 aa10.45□□□□□ -0.74
C9orf3-203ENST00000375315 TRAV36DV7A0A075B6V5 113 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 IGKV1D-8A0A087WSZ0 117 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 A0A1W2PNR3 127 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 PHF1O43189 567 aaPredicted RBP10.44□□□□□ -0.74
C9orf3-203ENST00000375315 SSSCA1O60232 199 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 YPEL1O60688 119 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 KBTBD11O94819 623 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 CNOT4O95628 575 aaKnown RBP10.44□□□□□ -0.74
C9orf3-203ENST00000375315 FTH1P19P0C7X4 201 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 COX6A1P12074 109 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 LCN2P80188 198 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 RPS19BP1Q86WX3 136 aaKnown RBP10.44□□□□□ -0.74
C9orf3-203ENST00000375315 ZNF738Q8NE65 137 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 OR4C5Q8NGB2 326 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 OR4B1Q8NGF8 309 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 YPEL2Q96QA6 119 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 ATP5SQ99766 215 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 GLRX2Q9NS18 164 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 PLA2G3Q9NZ20 509 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 ANXA10Q9UJ72 324 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 ZNF407Q9C0G0 2248 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 DMXL2Q8TDJ6 3036 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 IGHV1-45A0A0A0MS14 117 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 ANKUB1A6NFN9 424 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 ZNF850A8MQ14 1090 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 ALG1L2C9J202 215 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 PROB1E7EW31 1015 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 ZNF883P0CG24 379 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 CCL3P10147 92 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 PGCP20142 388 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 FXYD4P59646 89 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 RPL23P62829 140 aaKnown RBP10.44□□□□□ -0.74
C9orf3-203ENST00000375315 PRSS8Q16651 343 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 STPG4Q8N801 248 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 OR2V1Q8NHB1 315 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 RNF133Q8WVZ7 376 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 PARD6GQ9BYG4 376 aaPredicted RBP10.44□□□□□ -0.74
C9orf3-203ENST00000375315 NECAP2Q9NVZ3 263 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 WIPI2Q9Y4P8 454 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 TMED7-TICAM2A0A0A6YYA0 188 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 TRAPPC6AO75865 159 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 SYNGR4O95473 234 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 TOMM40O96008 361 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 IGHEP01854 428 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 UBE2G2P60604 165 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 MEX3BQ6ZN04 569 aaKnown RBP10.44□□□□□ -0.74
C9orf3-203ENST00000375315 CCDC71LQ8N9Z2 235 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 OR51E1Q8TCB6 317 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 VN1R17PQ8TDU5 208 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 KCNE4Q8WWG9 221 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 ZNF845Q96IR2 970 aaPredicted RBP10.44□□□□□ -0.74
C9orf3-203ENST00000375315 TUBG2Q9NRH3 451 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 SLC2A9Q9NRM0 540 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 ZNF319Q9P2F9 582 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 NXT1Q9UKK6 140 aaKnown RBP10.44□□□□□ -0.74
C9orf3-203ENST00000375315 ADAMTS20P59510 1910 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 SPTA1P02549 2419 aa10.44□□□□□ -0.74
C9orf3-203ENST00000375315 DOCK10Q96BY6 2186 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 MT-ATP6P00846 226 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 SRPXP78539 464 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 FNDC7Q5VTL7 733 aa10.43□□□□□ -0.74
C9orf3-203ENST00000375315 ZNF441Q8N8Z8 693 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms