RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 WSB2Q9NYS7 404 aaPredicted RBP8.91□□□□□ -0.98
PTCH1-204ENST00000375290 A0A1W2PNR3 127 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 SSPNQ14714 243 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 RTN4RL1Q86UN2 441 aaPredicted RBP8.91□□□□□ -0.98
PTCH1-204ENST00000375290 SNRNP40Q96DI7 357 aaKnown RBP8.91□□□□□ -0.98
PTCH1-204ENST00000375290 C1QTNF9BB2RNN3 333 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 SCCPDHQ8NBX0 429 aa8.91□□□□□ -0.98
PTCH1-204ENST00000375290 TAF15Q92804 592 aaKnown RBP eCLIP8.91□□□□□ -0.98
PTCH1-204ENST00000375290 ALKBH3Q96Q83 286 aaPredicted RBP8.91□□□□□ -0.98
PTCH1-204ENST00000375290 F8VVB4 439 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 F8VWA3 439 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 TCF21O43680 179 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 SLC25A17O43808 307 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 GLI4P10075 376 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 POC1AQ8NBT0 407 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 AUP1Q9Y679 476 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 RAB29O14966 203 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 PAGE4O60829 102 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 CTGFP29279 349 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 HES1Q14469 280 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 ZNF658BQ4V348 819 aaPredicted RBP8.9□□□□□ -0.98
PTCH1-204ENST00000375290 TMEM116Q8NCL8 245 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 CXCL13O43927 109 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 METAP1P53582 386 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 PSME4Q14997 1843 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 IZUMO4Q1ZYL8 232 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 CEACAM21Q3KPI0 293 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 RASL11BQ9BPW5 248 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 NCOR1P1Q9H4R4 102 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 OR1L8Q8NGR8 309 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 SOSTQ9BQB4 213 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 MS4A7Q9GZW8 240 aaPredicted RBP8.9□□□□□ -0.98
PTCH1-204ENST00000375290 SPANXCQ9NY87 97 aa8.9□□□□□ -0.98
PTCH1-204ENST00000375290 SLC17A3O00476 420 aa8.9□□□□□ -0.99
PTCH1-204ENST00000375290 OR1D5P58170 312 aa8.9□□□□□ -0.99
PTCH1-204ENST00000375290 RASL11AQ6T310 242 aa8.9□□□□□ -0.99
PTCH1-204ENST00000375290 TCF23Q7RTU1 214 aa8.9□□□□□ -0.99
PTCH1-204ENST00000375290 DPF1Q92782 380 aa8.9□□□□□ -0.99
PTCH1-204ENST00000375290 TM4SF19Q96DZ7 209 aa8.9□□□□□ -0.99
PTCH1-204ENST00000375290 RARRES2Q99969 163 aa8.9□□□□□ -0.99
PTCH1-204ENST00000375290 FGF16O43320 207 aa8.9□□□□□ -0.99
PTCH1-204ENST00000375290 LINC00869P0C866 280 aa8.9□□□□□ -0.99
PTCH1-204ENST00000375290 GPX4P36969 197 aaPredicted RBP8.9□□□□□ -0.99
PTCH1-204ENST00000375290 LYZL2Q7Z4W2 148 aa8.9□□□□□ -0.99
PTCH1-204ENST00000375290 CALHM1Q8IU99 346 aa8.9□□□□□ -0.99
PTCH1-204ENST00000375290 LRRC61Q9BV99 259 aa8.9□□□□□ -0.99
PTCH1-204ENST00000375290 IER3P46695 156 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 LAMTOR1Q6IAA8 161 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 INO80CQ6PI98 192 aaPredicted RBP8.89□□□□□ -0.99
PTCH1-204ENST00000375290 TMEM136Q6ZRR5 245 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 TGIF2LXQ8IUE1 241 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 STPG3Q8N7X2 389 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 C5orf17Q8NAS9 161 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 CLDN14O95500 239 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 FNDC7Q5VTL7 733 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 SLC25A38Q96DW6 304 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 A0A1B0GTI1 187 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 UPK3AO75631 287 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 CAMPP49913 170 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 NANOS3P60323 173 aaKnown RBP8.89□□□□□ -0.99
PTCH1-204ENST00000375290 SRSF9Q13242 221 aaKnown RBP eCLIP8.89□□□□□ -0.99
PTCH1-204ENST00000375290 PNKDQ8N490 385 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 DEFB119Q8N690 84 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 ADAD2Q8NCV1 583 aaKnown RBP8.89□□□□□ -0.99
PTCH1-204ENST00000375290 OR4D11Q8NGI4 311 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 C5orf66Q9H5L9 145 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 SEC16AO15027 2179 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 SOCS1O15524 211 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 TNFSF10P50591 281 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 RPS4XP62701 263 aaKnown RBP8.89□□□□□ -0.99
PTCH1-204ENST00000375290 OR11H4Q8NGC9 324 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 HSPB9Q9BQS6 159 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 TRAV38-1A0A0B4J264 116 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 LTC4SQ16873 150 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 AMMECR1LQ6DCA0 310 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 LILRA6Q6PI73 481 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 OR5A1Q8NGJ0 315 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 OR4P4Q8NGL7 312 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 SLC25A40Q8TBP6 338 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 NPIPB7O75200 414 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 RCC1P18754 421 aaPredicted RBP8.89□□□□□ -0.99
PTCH1-204ENST00000375290 DCAF12L2Q5VW00 463 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 NKX2-6A6NCS4 301 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 FAM90A9PA6NNJ1 464 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 GHRHP01286 108 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 RELBQ01201 579 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 TRAV17A0A0B4J275 112 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 KLF4O43474 513 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 FCGR3BO75015 233 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 RPS27P42677 84 aaKnown RBP8.89□□□□□ -0.99
PTCH1-204ENST00000375290 SRSF7Q16629 238 aaKnown RBP eCLIP8.89□□□□□ -0.99
PTCH1-204ENST00000375290 MIEN1Q9BRT3 115 aa8.89□□□□□ -0.99
PTCH1-204ENST00000375290 TMEM262E9PQX1 116 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 ELOVL1Q9BW60 279 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 PRDM14Q9GZV8 571 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 SIT1Q9Y3P8 196 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 FAM221AA4D161 298 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 TMIGD3P0DMS9 266 aaPredicted RBP8.88□□□□□ -0.99
PTCH1-204ENST00000375290 PGFP49763 221 aa8.88□□□□□ -0.99
PTCH1-204ENST00000375290 ZNF774Q6NX45 483 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms