RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SNX22Q96L94 193 aa15.07■□□□□ 0
HLA-DQB1-201ENST00000374943 DIRC2Q96SL1 478 aa15.07■□□□□ 0
HLA-DQB1-201ENST00000374943 SPIN2AQ99865 258 aa15.07■□□□□ 0
HLA-DQB1-201ENST00000374943 SPIN2BQ9BPZ2 258 aa15.07■□□□□ 0
HLA-DQB1-201ENST00000374943 NGBQ9NPG2 151 aa15.07■□□□□ 0
HLA-DQB1-201ENST00000374943 MED9Q9NWA0 146 aa15.07■□□□□ 0
HLA-DQB1-201ENST00000374943 CLEC18AA5D8T8 446 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 K7EPK0 472 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 TFF1P04155 84 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 RRASP10301 218 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 CEACAM6P40199 344 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 FAM71E2Q8N5Q1 922 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 CLEC18CQ8NCF0 446 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 OR1L1Q8NH94 360 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 RBPMSQ93062 196 aaKnown RBP15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 SLC25A32Q9H2D1 315 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 RNF7Q9UBF6 113 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 E5RGE8 158 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 HBZP02008 142 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 CD55P08174 381 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 HKR1P10072 659 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 MSMO1Q15800 293 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 ADIPOQQ15848 244 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 FBXL19-AS1Q494R0 122 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 NMSQ5H8A3 153 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 ABHD14BQ96IU4 210 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 PLEKHA2Q9HB19 425 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 GCM1Q9NP62 436 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 CYTL1Q9NRR1 136 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 NSG2Q9Y328 171 aa15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 LSM5Q9Y4Y9 91 aaKnown RBP15.06■□□□□ 0
HLA-DQB1-201ENST00000374943 TAAR5O14804 337 aa15.05■□□□□ -0
HLA-DQB1-201ENST00000374943 MGST3O14880 152 aa15.05■□□□□ -0
HLA-DQB1-201ENST00000374943 VDAC1P21796 283 aa15.05■□□□□ -0
HLA-DQB1-201ENST00000374943 IL2RGP31785 369 aa15.05■□□□□ -0
HLA-DQB1-201ENST00000374943 GLIPR1P48060 266 aa15.05■□□□□ -0
HLA-DQB1-201ENST00000374943 FAM219AQ8IW50 185 aa15.05■□□□□ -0
HLA-DQB1-201ENST00000374943 ZBTB34Q8NCN2 500 aa15.05■□□□□ -0
HLA-DQB1-201ENST00000374943 OR52M1Q8NGK5 317 aa15.05■□□□□ -0
HLA-DQB1-201ENST00000374943 UBALD1Q8TB05 177 aa15.05■□□□□ -0
HLA-DQB1-201ENST00000374943 PCNPQ8WW12 178 aaKnown RBP15.05■□□□□ -0
HLA-DQB1-201ENST00000374943 WFIKKN1Q96NZ8 548 aa15.05■□□□□ -0
HLA-DQB1-201ENST00000374943 CITED4Q96RK1 184 aa15.05■□□□□ -0
HLA-DQB1-201ENST00000374943 GPHA2Q96T91 129 aa15.05■□□□□ -0
HLA-DQB1-201ENST00000374943 PARP12Q9H0J9 701 aaKnown RBP15.05■□□□□ -0
HLA-DQB1-201ENST00000374943 NCOR1P1Q9H4R4 102 aa15.05■□□□□ -0
HLA-DQB1-201ENST00000374943 NKX2-6A6NCS4 301 aa15.04■□□□□ -0
HLA-DQB1-201ENST00000374943 ST8SIA3O43173 380 aa15.04■□□□□ -0
HLA-DQB1-201ENST00000374943 TNFSF12O43508 249 aa15.04■□□□□ -0
HLA-DQB1-201ENST00000374943 SCGB1D2O95969 90 aa15.04■□□□□ -0
HLA-DQB1-201ENST00000374943 TPT1P13693 172 aaKnown RBP15.04■□□□□ -0
HLA-DQB1-201ENST00000374943 CR1LQ2VPA4 569 aa15.04■□□□□ -0
HLA-DQB1-201ENST00000374943 COMMD7Q86VX2 200 aa15.04■□□□□ -0
HLA-DQB1-201ENST00000374943 FOXRED2Q8IWF2 684 aa15.04■□□□□ -0
HLA-DQB1-201ENST00000374943 OR13A1Q8NGR1 328 aa15.04■□□□□ -0
HLA-DQB1-201ENST00000374943 ANGPTL6Q8NI99 470 aa15.04■□□□□ -0
HLA-DQB1-201ENST00000374943 MRGPRDQ8TDS7 321 aa15.04■□□□□ -0
HLA-DQB1-201ENST00000374943 POMT1Q9Y6A1 747 aa15.04■□□□□ -0
HLA-DQB1-201ENST00000374943 C15orf65H3BRN8 121 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 K7N7A8 449 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 OR4A8P0C604 315 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 RPL12P30050 165 aaKnown RBP15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 HTD2P86397 168 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 BOLLQ8N9W6 283 aaKnown RBP15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 FAM216AQ8WUB2 273 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 LIN7CQ9NUP9 197 aaKnown RBP15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 SPTA1P02549 2419 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 IGHV3OR15-7A0A075B7D8 119 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 OR8U9P0C7N5 309 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 NCMAPQ5T1S8 102 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 STUMQ69YW2 141 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 PDZD9Q8IXQ8 264 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 ZNF561Q8N587 486 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 DRAM1Q8N682 238 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 ZNF645Q8N7E2 425 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 OR8U1Q8NH10 309 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 SDSLQ96GA7 329 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 ESRP2Q9H6T0 727 aaKnown RBP15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 KCNS2Q9ULS6 477 aa15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 RBM7Q9Y580 266 aaKnown RBP15.03■□□□□ -0
HLA-DQB1-201ENST00000374943 ODAMA1E959 279 aa15.02□□□□□ -0.01
HLA-DQB1-201ENST00000374943 RNF212BA8MTL3 300 aa15.02□□□□□ -0.01
HLA-DQB1-201ENST00000374943 C17orf100A8MU93 164 aa15.02□□□□□ -0.01
HLA-DQB1-201ENST00000374943 VSTM5A8MXK1 200 aa15.02□□□□□ -0.01
HLA-DQB1-201ENST00000374943 SLC25A6P12236 298 aa15.02□□□□□ -0.01
HLA-DQB1-201ENST00000374943 CHRNB4P30926 498 aa15.02□□□□□ -0.01
HLA-DQB1-201ENST00000374943 CD80P33681 288 aa15.02□□□□□ -0.01
HLA-DQB1-201ENST00000374943 P2RY1P47900 373 aa15.02□□□□□ -0.01
HLA-DQB1-201ENST00000374943 SNTB1Q13884 538 aaKnown RBP15.02□□□□□ -0.01
HLA-DQB1-201ENST00000374943 BAP18Q8IXM2 172 aa15.02□□□□□ -0.01
HLA-DQB1-201ENST00000374943 OR52L2PQ8NGH6 319 aa15.02□□□□□ -0.01
HLA-DQB1-201ENST00000374943 OR51H1Q8NH63 302 aa15.02□□□□□ -0.01
HLA-DQB1-201ENST00000374943 NINJ1Q92982 152 aa15.02□□□□□ -0.01
HLA-DQB1-201ENST00000374943 C11orf1Q9H5F2 150 aa15.02□□□□□ -0.01
HLA-DQB1-201ENST00000374943 SPINT2O43291 252 aa15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 ADAM20O43506 726 aa15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 SERPINE2P07093 398 aa15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 TNFRSF1AP19438 455 aa15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 GZMHP20718 246 aa15.01□□□□□ -0.01
HLA-DQB1-201ENST00000374943 SSTR5P35346 364 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms