RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 PPP1R32Q7Z5V6 425 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 CLEC18CQ8NCF0 446 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 OR5D13Q8NGL4 314 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 RCC1LQ96I51 464 aaKnown RBP9.47□□□□□ -0.89
CCDC40-203ENST00000374877 TMEM242Q9NWH2 141 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 LAMP3Q9UQV4 416 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 SPINK2P20155 84 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 FGF7P21781 194 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 DNLZQ5SXM8 178 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 TMEM183AQ8IXX5 376 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 FOXB1Q99853 325 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 SMIM7Q9BQ49 75 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 OR2H1Q9GZK4 316 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 WNT5BQ9H1J7 359 aa9.47□□□□□ -0.89
CCDC40-203ENST00000374877 CHD3Q12873 2000 aaKnown RBP9.46□□□□□ -0.89
CCDC40-203ENST00000374877 H0Y980 276 aa9.46□□□□□ -0.89
CCDC40-203ENST00000374877 IGHV3-9P01782 118 aa9.46□□□□□ -0.89
CCDC40-203ENST00000374877 AMBPP02760 352 aa9.46□□□□□ -0.89
CCDC40-203ENST00000374877 S100GP29377 79 aa9.46□□□□□ -0.89
CCDC40-203ENST00000374877 COL10A1Q03692 680 aa9.46□□□□□ -0.89
CCDC40-203ENST00000374877 NCR3LG1Q68D85 454 aa9.46□□□□□ -0.89
CCDC40-203ENST00000374877 BEND4Q6ZU67 534 aa9.46□□□□□ -0.89
CCDC40-203ENST00000374877 LILRB2Q8N423 598 aa9.46□□□□□ -0.89
CCDC40-203ENST00000374877 OR5R1Q8NH85 324 aa9.46□□□□□ -0.89
CCDC40-203ENST00000374877 RBKSQ9H477 322 aa9.46□□□□□ -0.89
CCDC40-203ENST00000374877 IGKV1-6A0A0C4DH72 117 aa9.46□□□□□ -0.9
CCDC40-203ENST00000374877 SNRPCP09234 159 aaKnown RBP9.46□□□□□ -0.9
CCDC40-203ENST00000374877 GZMBP10144 247 aa9.46□□□□□ -0.9
CCDC40-203ENST00000374877 PSG2P11465 335 aa9.46□□□□□ -0.9
CCDC40-203ENST00000374877 EDN3P14138 238 aa9.46□□□□□ -0.9
CCDC40-203ENST00000374877 F2RP25116 425 aa9.46□□□□□ -0.9
CCDC40-203ENST00000374877 GPM6AP51674 278 aa9.46□□□□□ -0.9
CCDC40-203ENST00000374877 ERVS71-1P61550 626 aa9.46□□□□□ -0.9
CCDC40-203ENST00000374877 JOSD1Q15040 202 aaPredicted RBP9.46□□□□□ -0.9
CCDC40-203ENST00000374877 YRDCQ86U90 279 aaKnown RBP9.46□□□□□ -0.9
CCDC40-203ENST00000374877 RPUSD4Q96CM3 377 aaKnown RBP9.46□□□□□ -0.9
CCDC40-203ENST00000374877 POM121Q96HA1 1249 aa9.46□□□□□ -0.9
CCDC40-203ENST00000374877 LURAP1Q96LR2 239 aa9.46□□□□□ -0.9
CCDC40-203ENST00000374877 VAX2Q9UIW0 290 aa9.46□□□□□ -0.9
CCDC40-203ENST00000374877 KIAA2026Q5HYC2 2103 aa9.46□□□□□ -0.9
CCDC40-203ENST00000374877 KIR2DS1A0A191URI9 304 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 MAP1LC3B2A6NCE7 125 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 ARGFXA6NJG6 315 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 HMGB3O15347 200 aaKnown RBP9.45□□□□□ -0.9
CCDC40-203ENST00000374877 KIR2DS4P43632 304 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 KIR2DS1Q14954 304 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 TMPRSS7Q7RTY8 843 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 C16orf82Q7Z2V1 217 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 OR56B2PQ8NGI1 322 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 RAB40CQ96S21 281 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 MAP1LC3BQ9GZQ8 125 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 CDH20Q9HBT6 801 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 CACNG5Q9UF02 275 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 ZNF391Q9UJN7 358 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 XKRY2A2RUG3 117 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 NAPSAO96009 420 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 MDH2P40926 338 aaKnown RBP9.45□□□□□ -0.9
CCDC40-203ENST00000374877 RAC1P63000 192 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 ARL16Q0P5N6 197 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 ZNF295-AS1Q8N0V1 137 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 OR1P1Q8NH06 330 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 IL1F10Q8WWZ1 152 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 PSENENQ9NZ42 101 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 OR14J1Q9UGF5 321 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 CYTIPO60759 359 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 TUSC2O75896 110 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 IFNA1P01562 189 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 ZNF16P17020 682 aaPredicted RBP9.45□□□□□ -0.9
CCDC40-203ENST00000374877 IDH3GP51553 393 aaPredicted RBP9.45□□□□□ -0.9
CCDC40-203ENST00000374877 CLDN15P56746 228 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 ZNF66Q6ZN08 573 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 Q6ZRM9 215 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 ZNF664Q8N3J9 261 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 OR1K1Q8NGR3 316 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 CPT1CQ8TCG5 803 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 HIST1H2AAQ96QV6 131 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 CTDSP1Q9GZU7 261 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 HIPK2Q9H2X6 1198 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 SRD5A3Q9H8P0 318 aa9.45□□□□□ -0.9
CCDC40-203ENST00000374877 DVL1O14640 695 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 CXCL13O43927 109 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 ZNF737O75373 536 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 APLNRP35414 380 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 TESK1Q15569 626 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 MRGPRGQ86SM5 289 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 LHX4Q969G2 390 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 ERRFI1Q9UJM3 462 aaPredicted RBP9.44□□□□□ -0.9
CCDC40-203ENST00000374877 DIDO1Q9BTC0 2240 aaKnown RBP9.44□□□□□ -0.9
CCDC40-203ENST00000374877 CD300LBA8K4G0 201 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 PPP5D1E7EU14 171 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 SYNGR2O43760 224 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 PLA2G5P39877 138 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 CARD18P57730 90 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 P2RY6Q15077 328 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 ZNF124Q15973 351 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 SPANXN5Q5MJ07 72 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 C9orf135Q5VTT2 229 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 TGIF2LXQ8IUE1 241 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 ZNF525Q8N782 197 aa9.44□□□□□ -0.9
CCDC40-203ENST00000374877 MBD3L1Q8WWY6 194 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms