RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 PCGF1Q9BSM1 259 aa12.63□□□□□ -0.39
COL9A2-202ENST00000372748 MAP1LC3BQ9GZQ8 125 aa12.63□□□□□ -0.39
COL9A2-202ENST00000372748 WNT5BQ9H1J7 359 aa12.63□□□□□ -0.39
COL9A2-202ENST00000372748 SRD5A3Q9H8P0 318 aa12.63□□□□□ -0.39
COL9A2-202ENST00000372748 WDR54Q9H977 334 aa12.63□□□□□ -0.39
COL9A2-202ENST00000372748 CACNG5Q9UF02 275 aa12.63□□□□□ -0.39
COL9A2-202ENST00000372748 DIDO1Q9BTC0 2240 aaKnown RBP12.63□□□□□ -0.39
COL9A2-202ENST00000372748 A0A1W2PPQ1 181 aa12.63□□□□□ -0.39
COL9A2-202ENST00000372748 H0Y980 276 aa12.63□□□□□ -0.39
COL9A2-202ENST00000372748 TGOLN2O43493 480 aa12.63□□□□□ -0.39
COL9A2-202ENST00000372748 NAPSAO96009 420 aa12.63□□□□□ -0.39
COL9A2-202ENST00000372748 MDH2P40926 338 aaKnown RBP12.63□□□□□ -0.39
COL9A2-202ENST00000372748 GPM6AP51674 278 aa12.63□□□□□ -0.39
COL9A2-202ENST00000372748 CASP6P55212 293 aa12.63□□□□□ -0.39
COL9A2-202ENST00000372748 CEACAM16Q2WEN9 425 aa12.63□□□□□ -0.39
COL9A2-202ENST00000372748 SLC23A3Q6PIS1 610 aa12.63□□□□□ -0.39
COL9A2-202ENST00000372748 IL1F10Q8WWZ1 152 aa12.63□□□□□ -0.39
COL9A2-202ENST00000372748 KIAA1324LA8MWY0 1029 aaPredicted RBP12.62□□□□□ -0.39
COL9A2-202ENST00000372748 ZNF737O75373 536 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 PFN1P07737 140 aaKnown RBP12.62□□□□□ -0.39
COL9A2-202ENST00000372748 CST2P09228 141 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 CCL2P13500 99 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 IDH3GP51553 393 aaPredicted RBP12.62□□□□□ -0.39
COL9A2-202ENST00000372748 RAC1P63000 192 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 HAPLN4Q86UW8 402 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 NDUFAF3Q9BU61 184 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 OR2H1Q9GZK4 316 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 PRSS50Q9UI38 385 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 PPP5D1E7EU14 171 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 TUSC2O75896 110 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 RFPL3SP0C7P2 107 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 SPCS3P61009 180 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 FOXO1Q12778 655 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 IL11RAQ14626 422 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 CYB5R2Q6BCY4 276 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 ZNF525Q8N782 197 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 MAFAQ8NHW3 353 aaPredicted RBP12.62□□□□□ -0.39
COL9A2-202ENST00000372748 MBD3L1Q8WWY6 194 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 LHX4Q969G2 390 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 DDA1Q9BW61 102 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 PLA2G3Q9NZ20 509 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 PSENENQ9NZ42 101 aa12.62□□□□□ -0.39
COL9A2-202ENST00000372748 TRAV39A0A0B4J263 110 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 DUXBA0A1W2PPF3 345 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 LRRC3CA6NJW4 275 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 CXCL13O43927 109 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 CBR3O75828 277 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 TRAPPC6AO75865 159 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 MRGPRGQ86SM5 289 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 AGBL5Q8NDL9 886 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 OR5T1Q8NG75 326 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 OR56B2PQ8NGI1 322 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 THOC3Q96J01 351 aaKnown RBP12.61□□□□□ -0.39
COL9A2-202ENST00000372748 FOXB1Q99853 325 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 CTDSP1Q9GZU7 261 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 FGF23Q9GZV9 251 aaPredicted RBP12.61□□□□□ -0.39
COL9A2-202ENST00000372748 ERRFI1Q9UJM3 462 aaPredicted RBP12.61□□□□□ -0.39
COL9A2-202ENST00000372748 PILRBQ9UKJ0 227 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 FUT9Q9Y231 359 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 TP53TG5Q9Y2B4 290 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 NCKAP5O14513 1909 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 HS3ST1O14792 307 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 ZNF16P17020 682 aaPredicted RBP12.61□□□□□ -0.39
COL9A2-202ENST00000372748 GALR1P47211 349 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 CARD18P57730 90 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 PMS2P11Q13670 270 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 TMEM241Q24JQ0 296 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 SPANXN5Q5MJ07 72 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 AAED1Q7RTV5 226 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 PRR18Q8N4B5 295 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 OR51G1Q8NGK1 321 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 UBALD1Q8TB05 177 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 RNASEH2CQ8TDP1 164 aaKnown RBP12.61□□□□□ -0.39
COL9A2-202ENST00000372748 RDH5Q92781 318 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 ZNF488Q96MN9 340 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 RAB40CQ96S21 281 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 ACTR3CQ9C0K3 210 aaPredicted RBP12.61□□□□□ -0.39
COL9A2-202ENST00000372748 NAT8Q9UHE5 227 aa12.61□□□□□ -0.39
COL9A2-202ENST00000372748 H7BYZ3 331 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 GALR2O43603 387 aaPredicted RBP12.6□□□□□ -0.39
COL9A2-202ENST00000372748 SYNGR2O43760 224 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 IGKV1D-33P01593 117 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 IGKV1-33P01594 117 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 OR4A8P0C604 315 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 G0S2P27469 103 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 GNB2P62879 340 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 BSXQ3C1V8 233 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 C9orf135Q5VTT2 229 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 GATAD1Q8WUU5 269 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 RAB24Q969Q5 203 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 UBE2L5PA0A1B0GUS4 154 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 MLF1P58340 268 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 WIPI1Q5MNZ9 446 aaPredicted RBP12.6□□□□□ -0.39
COL9A2-202ENST00000372748 ABLIM2Q6H8Q1 611 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 PCSK4Q6UW60 755 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 CPEB3Q8NE35 698 aaKnown RBP12.6□□□□□ -0.39
COL9A2-202ENST00000372748 OR4C12Q96R67 309 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 P2RX4Q99571 388 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 MTCH1Q9NZJ7 389 aa12.6□□□□□ -0.39
COL9A2-202ENST00000372748 ATP23Q9Y6H3 246 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms