RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 GSX1Q9H4S2 264 aaPredicted RBP4.63□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF703Q9H7S9 590 aaPredicted RBP4.63□□□□□ -1.67
ATG4A-204ENST00000372246 METTL7AQ9H8H3 244 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 PITPNC1Q9UKF7 332 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 ATG2AQ2TAZ0 1938 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 TMEM131Q92545 1883 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 LTBP2Q14767 1821 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 YLPM1P49750 1951 aaKnown RBP4.63□□□□□ -1.67
ATG4A-204ENST00000372246 TRAV34A0A0B4J273 112 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 UBE2L5PA0A1B0GUS4 154 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 ANKUB1A6NFN9 424 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 J3QW42 95 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 HS3ST1O14792 307 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 TNFRSF10CO14798 259 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 SPINK4O60575 86 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 PFN1P07737 140 aaKnown RBP4.63□□□□□ -1.67
ATG4A-204ENST00000372246 NPPCP23582 126 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 GATA4P43694 442 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 THBS3P49746 956 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 BLKP51451 505 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF41P51814 821 aaPredicted RBP4.63□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF92Q03936 586 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 GAGE1Q13065 139 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF266Q14584 549 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 PLPPR5Q32ZL2 321 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 SPANXN5Q5MJ07 72 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 DNLZQ5SXM8 178 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 ABLIM2Q6H8Q1 611 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 SHISA2Q6UWI4 295 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 SLC35E3Q7Z769 313 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF441Q8N8Z8 693 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 LFNGQ8NES3 379 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 MOB3AQ96BX8 217 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 GPR146Q96CH1 333 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 TXN2Q99757 166 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 TM2D1Q9BX74 207 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 FGF23Q9GZV9 251 aaPredicted RBP4.63□□□□□ -1.67
ATG4A-204ENST00000372246 DECR2Q9NUI1 292 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 SELENOKQ9Y6D0 94 aa4.63□□□□□ -1.67
ATG4A-204ENST00000372246 KALRNO60229 2985 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 DMXL1Q9Y485 3027 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 A0A1W2PQD3 144 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 SLC22A20A6NK97 555 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF737O75373 536 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 TK1P04183 234 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 C1QTNF9P0C862 333 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 BCL3P20749 454 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 CCL1P22362 96 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 PTGDSP41222 190 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 RABIFP47224 123 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 RPL23P62829 140 aaKnown RBP4.62□□□□□ -1.67
ATG4A-204ENST00000372246 ZP4Q12836 540 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 ODF1Q14990 250 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 FAM78BQ5VT40 261 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 SLC16A14Q7RTX9 510 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 RPP25LQ8N5L8 163 aaKnown RBP4.62□□□□□ -1.67
ATG4A-204ENST00000372246 OR4F5Q8NH21 305 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 OR5R1Q8NH85 324 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 TMEM234Q8WY98 164 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 DNASE2BQ8WZ79 361 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 RDH5Q92781 318 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 NABP1Q96AH0 204 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 BORCS8Q96FH0 119 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 OR4F4Q96R69 305 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 TBX15Q96SF7 602 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 ZNF286AQ9HBT8 521 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 SEPSECSQ9HD40 501 aaKnown RBP4.62□□□□□ -1.67
ATG4A-204ENST00000372246 ALKBH4Q9NXW9 302 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 OR1A1Q9P1Q5 309 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 PRSS50Q9UI38 385 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 PPP1R3CQ9UQK1 317 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 RNF115Q9Y4L5 304 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 ATP23Q9Y6H3 246 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 COL4A2P08572 1712 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 MAP1LC3B2A6NCE7 125 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 PPP5D1E7EU14 171 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 SIRPB1O00241 398 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 ETV2O00321 342 aaPredicted RBP4.62□□□□□ -1.67
ATG4A-204ENST00000372246 DVL1O14640 695 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 HSPA12AO43301 675 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 TCF21O43680 179 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 IGKV1-39P01597 117 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 IGKV1D-39P04432 117 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 CD38P28907 300 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 S100A7P31151 101 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 TAS2R30P59541 319 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 TLE4Q04727 773 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 C17orf67Q0P5P2 114 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 EIF3IQ13347 325 aaKnown RBP4.62□□□□□ -1.67
ATG4A-204ENST00000372246 RAB35Q15286 201 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 NMSQ5H8A3 153 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 PLCXD3Q63HM9 321 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 ACSM6Q6P461 480 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 TOMM20LQ6UXN7 152 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 MAML2Q8IZL2 1156 aaPredicted RBP4.62□□□□□ -1.67
ATG4A-204ENST00000372246 OSR2Q8N2R0 312 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 CPEB3Q8NE35 698 aaKnown RBP4.62□□□□□ -1.67
ATG4A-204ENST00000372246 OR13D1Q8NGV5 346 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 LHX4Q969G2 390 aa4.62□□□□□ -1.67
ATG4A-204ENST00000372246 RAB24Q969Q5 203 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms