RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ATG2BQ96BY7 2078 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 SIPA1L1O43166 1804 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 LTBP1Q14766 1721 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 ZNF79Q15937 498 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 VMA21Q3ZAQ7 101 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 MRPL55Q7Z7F7 128 aaKnown RBP11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 CBLN4Q9NTU7 201 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 MRM2Q9UI43 246 aaKnown RBP11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 CES1P1Q9UKY3 287 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 MPC1Q9Y5U8 109 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 CELA2AP08217 269 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 ERGP11308 486 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 COX6B1P14854 86 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 LSM6P62312 80 aaKnown RBP11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 PAX5Q02548 391 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 COX19Q49B96 90 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 CCL27Q9Y4X3 112 aa11.66□□□□□ -0.54
RAPGEF1-201ENST00000372189 TRAV38-1A0A0B4J264 116 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 IGKV1-8A0A0C4DH67 115 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 NPIPB8E9PQR5 432 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 ZAR1Q86SH2 424 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 SLC25A42Q86VD7 318 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 OR8B2Q96RD0 313 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 MANBALQ9NQG1 85 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 DTX4Q9Y2E6 619 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 ZFP30Q9Y2G7 519 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 AMMECR1Q9Y4X0 333 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 C3orf80F5H4A9 247 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 LPAR6P43657 344 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 DLX1P56177 255 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 GVQW1Q8N7I0 195 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 PRSS3P2Q8NHM4 247 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 NEIL1Q96FI4 390 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 ACY3Q96HD9 319 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 ADTRPQ96IZ2 230 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 SNX22Q96L94 193 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 UCN2Q96RP3 112 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 hADV38S2A0JD32 116 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 IGF2P01344 180 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 FAM78BQ5VT40 261 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 TRBV5-3A0A0A0MS03 114 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 A0A1W2PQM1 296 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 LIPFP07098 398 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 CEACAM6P40199 344 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 HLA-DRB5Q30154 266 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 FBXW9Q5XUX1 488 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 DHRS7BQ6IAN0 325 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 C19orf48Q6RUI8 117 aa11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 ERRFI1Q9UJM3 462 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF1-201ENST00000372189 ARG1P05089 322 aa11.65□□□□□ -0.55
RAPGEF1-201ENST00000372189 ZNF883P0CG24 379 aa11.65□□□□□ -0.55
RAPGEF1-201ENST00000372189 PAFAH1B2P68402 229 aa11.65□□□□□ -0.55
RAPGEF1-201ENST00000372189 TMEM95Q3KNT9 176 aa11.65□□□□□ -0.55
RAPGEF1-201ENST00000372189 MESTQ5EB52 335 aa11.65□□□□□ -0.55
RAPGEF1-201ENST00000372189 OR10G4Q8NGN3 311 aa11.65□□□□□ -0.55
RAPGEF1-201ENST00000372189 OR10G9Q8NGN4 311 aa11.65□□□□□ -0.55
RAPGEF1-201ENST00000372189 OR10G7Q8NGN6 311 aa11.65□□□□□ -0.55
RAPGEF1-201ENST00000372189 PDCD6O75340 191 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 HIKESHIQ53FT3 197 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 INO80CQ6PI98 192 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 TMEM101Q96IK0 257 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 KIF13BQ9NQT8 1826 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 GYPAP02724 150 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 HPXP02790 462 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 ACP1P24666 158 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 PDCD1Q15116 288 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 TMEM147Q9BVK8 224 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 CACNG5Q9UF02 275 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 PSG11Q9UQ72 335 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 TUBGCP6Q96RT7 1819 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 PTPRZ1P23471 2315 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 BRCA1P38398 1863 aaKnown RBP11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 MED19A0JLT2 244 aaPredicted RBP11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 FFAR1O14842 300 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 ERVS71-1P61550 626 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 TGIF1Q15583 401 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 C20orf196Q8IYI0 205 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 OR2T10Q8NGZ9 312 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 MFNGO00587 321 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 BGLAPP02818 100 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 ID4P47928 161 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 DYNLT3P51808 116 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 BSXQ3C1V8 233 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 NSUN5P2Q63ZY6 315 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 SAP30LQ9HAJ7 183 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 C7orf77A4D0Y5 90 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 DNLZQ5SXM8 178 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 TMEM230Q96A57 120 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 SPXQ9BT56 116 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 OR2H1Q9GZK4 316 aa11.64□□□□□ -0.55
RAPGEF1-201ENST00000372189 DOCK3Q8IZD9 2030 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 COX7A1P24310 79 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 SRSF6Q13247 344 aaKnown RBP11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 TMEM171Q8WVE6 324 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 SSBP4Q9BWG4 385 aaPredicted RBP11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 TREM2Q9NZC2 230 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 ICAM5Q9UMF0 924 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 ZNF345Q14585 488 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 RTP5Q14D33 572 aa11.63□□□□□ -0.55
RAPGEF1-201ENST00000372189 LIAT1Q6ZQX7 453 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms