RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 OR4K1Q8NGD4 311 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 OR5K2Q8NHB8 316 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 C16orf52Q8NHV5 167 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 DOK4Q8TEW6 326 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 TMEM170AQ8WVE7 144 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 SKA2Q8WVK7 121 aaPredicted RBP4.33□□□□□ -1.72
UBE3D-202ENST00000369746 SMIM19Q96E16 107 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 ZMYND19Q96E35 227 aaPredicted RBP4.33□□□□□ -1.72
UBE3D-202ENST00000369746 C1orf123Q9NWV4 160 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 FUT9Q9Y231 359 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 LRP4O75096 1905 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 KIR2DS1A0A191URI9 304 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 TMEM272A0A1B0GTI8 110 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 A0A1W2PNR3 127 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 TMEM50AO95807 157 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 CA1P00915 261 aaPredicted RBP4.33□□□□□ -1.72
UBE3D-202ENST00000369746 NGFRP08138 427 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 CX3CR1P49238 355 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 TMEM50BP56557 158 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 ZNF763Q0D2J5 394 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 GAGE5Q13069 117 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 GAGE6Q13070 117 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 PPP1R1AQ13522 171 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 KIR2DS1Q14954 304 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 C4orf26Q17RF5 130 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 FAM78BQ5VT40 261 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 FAM166AQ6J272 317 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 LILRA3Q8N6C8 439 aaPredicted RBP4.33□□□□□ -1.72
UBE3D-202ENST00000369746 CHST4Q8NCG5 386 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 OR4N2Q8NGD1 307 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 OR4L1Q8NH43 312 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 OR1F12Q8NHA8 337 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 SECTM1Q8WVN6 248 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 PSMG3Q9BT73 122 aaPredicted RBP4.33□□□□□ -1.72
UBE3D-202ENST00000369746 DOHHQ9BU89 302 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 NMES1Q9C002 83 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 MAP1LC3AQ9H492 121 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 BANF2Q9H503 90 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 B4GALT7Q9UBV7 327 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 SIGLEC7Q9Y286 467 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 ETV7Q9Y603 341 aa4.33□□□□□ -1.72
UBE3D-202ENST00000369746 URB1O60287 2271 aaKnown RBP4.33□□□□□ -1.72
UBE3D-202ENST00000369746 A0A1W2PRS3 328 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 C9JQL5 133 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 FGF17O60258 216 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 IGHA1P01876 353 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 CSN2P05814 226 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 CELA2BP08218 269 aaPredicted RBP4.32□□□□□ -1.72
UBE3D-202ENST00000369746 CTSEP14091 401 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 LIFP15018 202 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 ZNF43P17038 809 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 NKX2-1P43699 371 aaPredicted RBP4.32□□□□□ -1.72
UBE3D-202ENST00000369746 XCR1P46094 333 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 GABRA2P47869 451 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 THBS3P49746 956 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 ZNF134P52741 427 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 PIGPP57054 158 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 SELENOWP63302 87 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 SRPXP78539 464 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 RUNX1Q01196 453 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 SMAGPQ0VAQ4 97 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 TAF10Q12962 218 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 TBC1D28Q2M2D7 210 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 ALG10Q5BKT4 473 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 STPG4Q8N801 248 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 OR1B1Q8NGR6 318 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 SLC38A5Q8WUX1 472 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 TSSK2Q96PF2 358 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 ATP5SQ99766 215 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 MRPL45Q9BRJ2 306 aaKnown RBP4.32□□□□□ -1.72
UBE3D-202ENST00000369746 CIPCQ9C0C6 399 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 WIPI2Q9Y4P8 454 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 HS3ST3B1Q9Y662 390 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 PTPRQQ9UMZ3 2332 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 TENM4Q6N022 2769 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 A0A1W2PR80 420 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 SLC22A20A6NK97 555 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 B5MCH6 92 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 USP17L23D6RBM5 183 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 DCTN6O00399 190 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 LDB3O75112 727 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 CXCL1P09341 107 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 TCN2P20062 427 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 LPAR6P43657 344 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 OSTNP61366 133 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 RGNQ15493 299 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 ZIC1Q15915 447 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 IGFBP7Q16270 282 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 TAL2Q16559 108 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 SFRP4Q6FHJ7 346 aaPredicted RBP4.32□□□□□ -1.72
UBE3D-202ENST00000369746 FRRS1Q6ZNA5 592 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 MRGPRGQ86SM5 289 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 B3GALNT2Q8NCR0 500 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 OR5AU1Q8NGC0 362 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 OR6N2Q8NGY6 317 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 GPR119Q8TDV5 335 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 DDIT4LQ96D03 193 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 TVP23CQ96ET8 276 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 GINS3Q9BRX5 216 aa4.32□□□□□ -1.72
UBE3D-202ENST00000369746 OR51I1Q9H343 314 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms