RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 ZNF92Q03936 586 aa13.71□□□□□ -0.22
SYNCRIP-202ENST00000369622 CNN3Q15417 329 aaKnown RBP13.71□□□□□ -0.22
SYNCRIP-202ENST00000369622 RNF138Q8WVD3 245 aa13.71□□□□□ -0.22
SYNCRIP-202ENST00000369622 TMEM54Q969K7 222 aa13.71□□□□□ -0.22
SYNCRIP-202ENST00000369622 AURKAIP1Q9NWT8 199 aaPredicted RBP13.71□□□□□ -0.22
SYNCRIP-202ENST00000369622 ZNF407Q9C0G0 2248 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 EXPH5Q8NEV8 1989 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 IGLV3-1P01715 115 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 HSPB1P04792 205 aaKnown RBP13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 LIFP15018 202 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 DUSP1P28562 367 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 SSR4P51571 173 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 SUCLG1P53597 346 aaKnown RBP13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 MRPS34P82930 218 aaKnown RBP13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 MALLQ13021 153 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 PCOLCEQ15113 449 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 C10orf128Q5T292 105 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 ST6GALNAC3Q8NDV1 305 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 OR4C5Q8NGB2 326 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 OR1F12Q8NHA8 337 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 ZNF703Q9H7S9 590 aaPredicted RBP13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 ZNF286AQ9HBT8 521 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 UBE2J1Q9Y385 318 aaPredicted RBP13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 DOCK7Q96N67 2140 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 CXCL13O43927 109 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 VAMP5O95183 116 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 CCL4P13236 92 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 AADACP22760 399 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 GALR1P47211 349 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 HINT1P49773 126 aaPredicted RBP13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 FAM3BP58499 235 aaPredicted RBP13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 EWSR1Q01844 656 aaKnown RBP eCLIP13.7□□□□□ -0.222e-7■■■■□ 24.5
SYNCRIP-202ENST00000369622 LIAT1Q6ZQX7 453 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 RPS19BP1Q86WX3 136 aaKnown RBP13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 LGI3Q8N145 548 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 SPSB1Q96BD6 273 aa13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 RPUSD4Q96CM3 377 aaKnown RBP13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 PATZ1Q9HBE1 687 aaKnown RBP13.7□□□□□ -0.22
SYNCRIP-202ENST00000369622 CFIP05156 583 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 DSCR4P56555 118 aaPredicted RBP13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 FAM27BQ5VT28 67 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 AAED1Q7RTV5 226 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 FGFBP3Q8TAT2 258 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 VAMP8Q9BV40 100 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 SELENOKQ9Y6D0 94 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 CEBPZOSA8MTT3 80 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 TMEM238C9JI98 176 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 TDGF1P13385 188 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 CCL2P13500 99 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 CCKARP32238 428 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 CXCL12P48061 93 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 NPBWR2P48146 333 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 CEACAM16Q2WEN9 425 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 ZNF506Q5JVG8 444 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 TMEM171Q8WVE6 324 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 GLRX2Q9NS18 164 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 RNF115Q9Y4L5 304 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 RBM7Q9Y580 266 aaKnown RBP13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 GTF3C1Q12789 2109 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 LOC102725191A0A1B0GVB3 256 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 NKX2-6A6NCS4 301 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 OTX1P32242 354 aaPredicted RBP13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 LDLRAD2Q5SZI1 272 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 SLC25A24Q6NUK1 477 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 PCED1AQ9H1Q7 454 aa13.69□□□□□ -0.22
SYNCRIP-202ENST00000369622 HMGB3O15347 200 aaKnown RBP13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 TCN2P20062 427 aa13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 GCH1P30793 250 aa13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 KLF3P57682 345 aaPredicted RBP13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 GPR157Q5UAW9 335 aa13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 ZCCHC14Q8WYQ9 949 aaKnown RBP13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 GPR35Q9HC97 309 aa13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 A0A0G2JMM0 328 aa13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 A0A1W2PPB8 328 aa13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 A0A1W2PRS3 328 aa13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 KIR3DP1A8MWS1 328 aa13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 SSSCA1O60232 199 aa13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 FKBP2P26885 142 aaKnown RBP13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 EPHA8P29322 1005 aaPredicted RBP13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 PSG4Q00888 419 aa13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 MRPL14Q6P1L8 145 aaKnown RBP13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 SMIM15Q7Z3B0 74 aa13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 ZNF695Q8IW36 515 aa13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 OR5C1Q8NGR4 320 aa13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 CLUHP3Q96NS8 147 aa13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 SDF2L1Q9HCN8 221 aa13.68□□□□□ -0.22
SYNCRIP-202ENST00000369622 H7BYZ3 331 aa13.67□□□□□ -0.22
SYNCRIP-202ENST00000369622 TECTBQ96PL2 329 aa13.67□□□□□ -0.22
SYNCRIP-202ENST00000369622 OR5B12Q96R08 314 aa13.67□□□□□ -0.22
SYNCRIP-202ENST00000369622 A0A1B0GW64 132 aa13.67□□□□□ -0.22
SYNCRIP-202ENST00000369622 SYNGR3O43761 229 aa13.67□□□□□ -0.22
SYNCRIP-202ENST00000369622 CNN1P51911 297 aaKnown RBP13.67□□□□□ -0.22
SYNCRIP-202ENST00000369622 RIPPLY3P57055 190 aa13.67□□□□□ -0.22
SYNCRIP-202ENST00000369622 RPS18P62269 152 aaKnown RBP13.67□□□□□ -0.22
SYNCRIP-202ENST00000369622 SRYQ05066 204 aa13.67□□□□□ -0.22
SYNCRIP-202ENST00000369622 TMPRSS7Q7RTY8 843 aa13.67□□□□□ -0.22
SYNCRIP-202ENST00000369622 SAXO1Q8IYX7 474 aa13.67□□□□□ -0.22
SYNCRIP-202ENST00000369622 SPEM1Q8N4L4 309 aa13.67□□□□□ -0.22
SYNCRIP-202ENST00000369622 SVIPQ8NHG7 77 aa13.67□□□□□ -0.22
SYNCRIP-202ENST00000369622 MSI2Q96DH6 328 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms