RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ZNF474Q6S9Z5 364 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-204ENST00000369530 COMMD2Q86X83 199 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF440Q8IYI8 595 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 TMEM156Q8N614 296 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 NINJ1Q92982 152 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 PGAM5Q96HS1 289 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 C4orf36Q96KX1 117 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 REPIN1Q9BWE0 567 aaKnown RBP5.87□□□□□ -1.47
CSDE1-204ENST00000369530 CST9LQ9H4G1 147 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 LYRM2Q9NU23 88 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-204ENST00000369530 AK6Q9Y3D8 172 aaKnown RBP5.87□□□□□ -1.47
CSDE1-204ENST00000369530 DNAH1Q9P2D7 4330 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 A0A1B0GU03 582 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 RPS27P42677 84 aaKnown RBP5.87□□□□□ -1.47
CSDE1-204ENST00000369530 RPL29P47914 159 aaKnown RBP5.87□□□□□ -1.47
CSDE1-204ENST00000369530 TAS2R31P59538 309 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 RPS4XP62701 263 aaKnown RBP5.87□□□□□ -1.47
CSDE1-204ENST00000369530 PDZD11Q5EBL8 140 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 ACTL10Q5JWF8 245 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 TPTE2P1Q5T6R2 138 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 TMED4Q7Z7H5 227 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 SLC26A10Q8NG04 563 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 OR6N2Q8NGY6 317 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF48Q96MX3 618 aaPredicted RBP5.87□□□□□ -1.47
CSDE1-204ENST00000369530 OR11A1Q9GZK7 315 aa5.87□□□□□ -1.47
CSDE1-204ENST00000369530 J3QR06 171 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 IGHMP01871 453 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 HLA-AP01891 365 aaKnown RBP5.86□□□□□ -1.47
CSDE1-204ENST00000369530 ERCC1P07992 297 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-204ENST00000369530 GTF2F2P13984 249 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 FAHP16930 419 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 OR12D2P58182 307 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 RBPJQ06330 500 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 FOXF2Q12947 444 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 PPP1R1AQ13522 171 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF684Q5T5D7 378 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 RPL7L1Q6DKI1 246 aaKnown RBP5.86□□□□□ -1.47
CSDE1-204ENST00000369530 ATG4DQ86TL0 474 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-204ENST00000369530 PTX4Q96A99 478 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 PELI1Q96FA3 418 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 SNX22Q96L94 193 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 C20orf24Q9BUV8 137 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 POLR1DQ9Y2S0 133 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 A0A1B0GTH9 108 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 PNMTP11086 282 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 SERPINA2P20848 420 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 ELLP55199 621 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-204ENST00000369530 COL10A1Q03692 680 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 C5orf64Q2M2E5 130 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 FBLN7Q53RD9 439 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 FAM220AQ7Z4H9 259 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 BATF2Q8N1L9 274 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 FAM89BQ8N5H3 189 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 SUMF2Q8NBJ7 301 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF519Q8TB69 540 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 ASB5Q8WWX0 329 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 NKX3-1Q99801 234 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF319Q9P2F9 582 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 NOP16Q9Y3C1 178 aaKnown RBP5.86□□□□□ -1.47
CSDE1-204ENST00000369530 MRPS16Q9Y3D3 137 aaKnown RBP5.86□□□□□ -1.47
CSDE1-204ENST00000369530 LRP12Q9Y561 859 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 A0A1W2PNV4 684 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 OR4C45A6NMZ5 311 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 SHISA8B8ZZ34 492 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 RENP00797 406 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 PFN1P07737 140 aaKnown RBP5.86□□□□□ -1.47
CSDE1-204ENST00000369530 SFTPDP35247 375 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 TAGLN2P37802 199 aaKnown RBP5.86□□□□□ -1.47
CSDE1-204ENST00000369530 LGALS7P47929 136 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 SOX2P48431 317 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 LTBQ06643 244 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF616Q08AN1 781 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF738Q8NE65 137 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 KIAA1456Q9P272 454 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 CDC42EP3Q9UKI2 254 aa5.86□□□□□ -1.47
CSDE1-204ENST00000369530 HSPB2A8KAH6 182 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 ZNF705GA8MUZ8 300 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-204ENST00000369530 CLDN34H7C241 214 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 MSTNO14793 375 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 DNPH1O43598 174 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 STAG3L3P0CL85 134 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 GZMHP20718 246 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 DNASE1L1P49184 302 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 CDC34P49427 236 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-204ENST00000369530 FXYD6P3P58550 94 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 HIST1H3AP68431 136 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 SIRPAP78324 504 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 HSPB2Q16082 182 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 ACOT6Q3I5F7 207 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-204ENST00000369530 C9orf135Q5VTT2 229 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 TMEM225Q6GV28 225 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 LINC00696Q6ZRV3 163 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 STPG4Q8N801 248 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 FAM169BQ8N8A8 192 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 TMEM178AQ8NBL3 297 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 NUDT16L1Q9BRJ7 211 aaKnown RBP5.85□□□□□ -1.47
CSDE1-204ENST00000369530 TMUB1Q9BVT8 246 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 CST11Q9H112 138 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 TRBV2A0A0J9YWF9 115 aa5.85□□□□□ -1.47
CSDE1-204ENST00000369530 NPIPB13A6NJU9 1138 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms