RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 SLC6A7Q99884 636 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 IFT46Q9NQC8 304 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 OR1A1Q9P1Q5 309 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 SLC23A1Q9UHI7 598 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 PSG11Q9UQ72 335 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 TLN2Q9Y4G6 2542 aa11.31□□□□□ -0.6
TPM3-211ENST00000368531 A0A0U1RQK1 487 aa11.3□□□□□ -0.6
TPM3-211ENST00000368531 BET1O15155 118 aa11.3□□□□□ -0.6
TPM3-211ENST00000368531 HSPA12AO43301 675 aa11.3□□□□□ -0.6
TPM3-211ENST00000368531 KIR2DS4P43632 304 aa11.3□□□□□ -0.6
TPM3-211ENST00000368531 PRRX1P54821 245 aa11.3□□□□□ -0.6
TPM3-211ENST00000368531 IL18Q14116 193 aa11.3□□□□□ -0.6
TPM3-211ENST00000368531 KIR2DS1Q14954 304 aa11.3□□□□□ -0.6
TPM3-211ENST00000368531 DEFB112Q30KQ8 113 aa11.3□□□□□ -0.6
TPM3-211ENST00000368531 IGSF11Q5DX21 431 aa11.3□□□□□ -0.6
TPM3-211ENST00000368531 ZNF626Q68DY1 528 aa11.3□□□□□ -0.6
TPM3-211ENST00000368531 OR11H6Q8NGC7 330 aa11.3□□□□□ -0.6
TPM3-211ENST00000368531 OR52M1Q8NGK5 317 aa11.3□□□□□ -0.6
TPM3-211ENST00000368531 OR9G1Q8NH87 305 aa11.3□□□□□ -0.6
TPM3-211ENST00000368531 ABHD1Q96SE0 405 aa11.3□□□□□ -0.6
TPM3-211ENST00000368531 FAM96BQ9Y3D0 163 aa11.3□□□□□ -0.6
TPM3-211ENST00000368531 A0A087X0M5 115 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 IGKV1-6A0A0C4DH72 117 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 A0A1B0GX30 115 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 FABP12A6NFH5 140 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 POM121CA8CG34 1229 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 ODF3BA8MYP8 253 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 J3QR06 171 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 SLC31A2O15432 143 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 CD34P28906 385 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 CEACAM6P40199 344 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 BPIFB3P59826 476 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 HTD2P86397 168 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 HERPUD1Q15011 391 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 MORN2Q502X0 79 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 PLA1AQ53H76 456 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 FAM131AQ6UXB0 335 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 BEST4Q8NFU0 473 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 OR4A4PQ8NGN8 299 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 ZNF596Q8TC21 504 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 ZDHHC16Q969W1 377 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 OCSTAMPQ9BR26 566 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 JPT1Q9UK76 154 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 HILPDAQ9Y5L2 63 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 A3GALT2U3KPV4 340 aa11.29□□□□□ -0.6
TPM3-211ENST00000368531 SONP18583 2426 aaKnown RBP11.29□□□□□ -0.6
TPM3-211ENST00000368531 LPLP06858 475 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 ZBTB25P24278 435 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 HTR1DP28221 377 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 CBX5P45973 191 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 SCGB2A2Q13296 93 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 SSX2Q16385 188 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 SRSF7Q16629 238 aaKnown RBP eCLIP11.28□□□□□ -0.63e-11■■■■□ 20.4
TPM3-211ENST00000368531 HLA-DRB5Q30154 266 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 TMEM30BQ3MIR4 351 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 MIDNQ504T8 468 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 LDLRAD2Q5SZI1 272 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 HOGA1Q86XE5 327 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 SIGLECL1Q8N7X8 197 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 OR4P4Q8NGL7 312 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 OR10X1Q8NGY0 326 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 OR52I2Q8NH67 350 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 GPX8Q8TED1 209 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 ZNF48Q96MX3 618 aaPredicted RBP11.28□□□□□ -0.6
TPM3-211ENST00000368531 PARP12Q9H0J9 701 aaKnown RBP11.28□□□□□ -0.6
TPM3-211ENST00000368531 ANXA10Q9UJ72 324 aa11.28□□□□□ -0.6
TPM3-211ENST00000368531 FN1P02751 2386 aaKnown RBP11.27□□□□□ -0.6
TPM3-211ENST00000368531 J3QRK9 145 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 YPEL1O60688 119 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 RGS11O94810 467 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 IGLV1-47P01700 117 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 ZNF134P52741 427 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 ARPC4P59998 168 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 DGCR2P98153 550 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 CT45A1Q5HYN5 189 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 STEAP3Q658P3 488 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 PYHIN1Q6K0P9 492 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 Q6ZS49 121 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 DYNAPQ8N1N2 210 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 BEND2Q8NDZ0 799 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 OR6Q1Q8NGQ2 317 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 OR10J5Q8NHC4 309 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 CT45A3Q8NHU0 189 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 FCAMRQ8WWV6 532 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 YPEL2Q96QA6 119 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 GINS4Q9BRT9 223 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 MMP28Q9H239 520 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 SCPEP1Q9HB40 452 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 TNFRSF19Q9NS68 423 aa11.27□□□□□ -0.61
TPM3-211ENST00000368531 TBL2Q9Y4P3 447 aaKnown RBP11.27□□□□□ -0.61
TPM3-211ENST00000368531 LEUTXA8MZ59 168 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 BUB1B-PAK6H3BSN5 160 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 SULT1C2O00338 296 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 ST8SIA5O15466 376 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 FBP1P09467 338 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 RBMS3Q6XE24 437 aaKnown RBP11.26□□□□□ -0.61
TPM3-211ENST00000368531 C9orf139Q6ZV77 190 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 LYG1Q8N1E2 194 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 ZNF439Q8NDP4 499 aa11.26□□□□□ -0.61
TPM3-211ENST00000368531 OR2AK2Q8NG84 335 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms