RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 TMEM30BQ3MIR4 351 aa18.01■□□□□ 0.47
ECHDC1-203ENST00000368291 OR10V1Q8NGI7 309 aa18.01■□□□□ 0.47
ECHDC1-203ENST00000368291 KCNIP1Q9NZI2 227 aa18.01■□□□□ 0.47
ECHDC1-203ENST00000368291 DAPK2Q9UIK4 370 aa18.01■□□□□ 0.47
ECHDC1-203ENST00000368291 MADCAM1Q13477 382 aa18■□□□□ 0.47
ECHDC1-203ENST00000368291 GNMTQ14749 295 aa18■□□□□ 0.47
ECHDC1-203ENST00000368291 MORN2Q502X0 79 aa18■□□□□ 0.47
ECHDC1-203ENST00000368291 SLC25A48Q6ZT89 311 aaKnown RBP18■□□□□ 0.47
ECHDC1-203ENST00000368291 OR52L2PQ8NGH6 319 aa18■□□□□ 0.47
ECHDC1-203ENST00000368291 OR10R2Q8NGX6 335 aa18■□□□□ 0.47
ECHDC1-203ENST00000368291 TOMM40LQ969M1 308 aa18■□□□□ 0.47
ECHDC1-203ENST00000368291 RPEQ96AT9 228 aa18■□□□□ 0.47
ECHDC1-203ENST00000368291 OCSTAMPQ9BR26 566 aa18■□□□□ 0.47
ECHDC1-203ENST00000368291 RAB18Q9NP72 206 aa18■□□□□ 0.47
ECHDC1-203ENST00000368291 GNG12Q9UBI6 72 aa18■□□□□ 0.47
ECHDC1-203ENST00000368291 A0A1W2PPI3 338 aa17.99■□□□□ 0.47
ECHDC1-203ENST00000368291 SNRPBP14678 240 aaKnown RBP17.99■□□□□ 0.47
ECHDC1-203ENST00000368291 HTD2P86397 168 aa17.99■□□□□ 0.47
ECHDC1-203ENST00000368291 TIMM50Q3ZCQ8 353 aa17.99■□□□□ 0.47
ECHDC1-203ENST00000368291 CT45A1Q5HYN5 189 aa17.99■□□□□ 0.47
ECHDC1-203ENST00000368291 OR10X1Q8NGY0 326 aa17.99■□□□□ 0.47
ECHDC1-203ENST00000368291 CT45A3Q8NHU0 189 aa17.99■□□□□ 0.47
ECHDC1-203ENST00000368291 ST6GALNAC6Q969X2 333 aa17.99■□□□□ 0.47
ECHDC1-203ENST00000368291 RAB3CQ96E17 227 aa17.99■□□□□ 0.47
ECHDC1-203ENST00000368291 RIMS4Q9H426 269 aaPredicted RBP17.99■□□□□ 0.47
ECHDC1-203ENST00000368291 CHMP1AQ9HD42 196 aaPredicted RBP17.99■□□□□ 0.47
ECHDC1-203ENST00000368291 OR2S2Q9NQN1 319 aa17.99■□□□□ 0.47
ECHDC1-203ENST00000368291 PITPNC1Q9UKF7 332 aa17.99■□□□□ 0.47
ECHDC1-203ENST00000368291 RNF114Q9Y508 228 aa17.99■□□□□ 0.47
ECHDC1-203ENST00000368291 FAM90A9PA6NNJ1 464 aa17.98■□□□□ 0.47
ECHDC1-203ENST00000368291 MFNGO00587 321 aa17.98■□□□□ 0.47
ECHDC1-203ENST00000368291 AIREO43918 545 aa17.98■□□□□ 0.47
ECHDC1-203ENST00000368291 BRS3P32247 399 aa17.98■□□□□ 0.47
ECHDC1-203ENST00000368291 PROK1P58294 105 aa17.98■□□□□ 0.47
ECHDC1-203ENST00000368291 CCDC144NLQ6NUI1 221 aa17.98■□□□□ 0.47
ECHDC1-203ENST00000368291 WFDC12Q8WWY7 111 aa17.98■□□□□ 0.47
ECHDC1-203ENST00000368291 CFHR4Q92496 578 aa17.98■□□□□ 0.47
ECHDC1-203ENST00000368291 GALMQ96C23 342 aa17.98■□□□□ 0.47
ECHDC1-203ENST00000368291 CMSS1Q9BQ75 279 aaKnown RBP17.98■□□□□ 0.47
ECHDC1-203ENST00000368291 Q9N2K0 584 aa17.98■□□□□ 0.47
ECHDC1-203ENST00000368291 JPT1Q9UK76 154 aa17.98■□□□□ 0.47
ECHDC1-203ENST00000368291 KIR2DS4P43632 304 aa17.97■□□□□ 0.47
ECHDC1-203ENST00000368291 KRTAP10-3P60369 221 aa17.97■□□□□ 0.47
ECHDC1-203ENST00000368291 MOB1BQ7L9L4 216 aa17.97■□□□□ 0.47
ECHDC1-203ENST00000368291 SETD6Q8TBK2 473 aa17.97■□□□□ 0.47
ECHDC1-203ENST00000368291 LGALS14Q8TCE9 139 aa17.97■□□□□ 0.47
ECHDC1-203ENST00000368291 RANBP3Q9H6Z4 567 aaPredicted RBP17.97■□□□□ 0.47
ECHDC1-203ENST00000368291 C12orf4Q9NQ89 552 aa17.97■□□□□ 0.47
ECHDC1-203ENST00000368291 SIGLEC9Q9Y336 463 aa17.97■□□□□ 0.47
ECHDC1-203ENST00000368291 METTL21EPA6NDL7 271 aa17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 TIMM23O14925 209 aa17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 YPEL1O60688 119 aa17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 HIST1H1DP16402 221 aaKnown RBP17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 GNB3P16520 340 aa17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 PPP1CCP36873 323 aaKnown RBP17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 MNDAP41218 407 aa17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 RAB7AP51149 207 aa17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 ARHGDIBP52566 201 aa17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 ZNF137PP52743 207 aa17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 LSM3P62310 102 aaKnown RBP17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 SRSF4Q08170 494 aaKnown RBP17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 ZNF816Q0VGE8 651 aaPredicted RBP17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 OR13F1Q8NGS4 319 aa17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 YPEL2Q96QA6 119 aa17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 FUNDC2Q9BWH2 189 aa17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 NPFFR1Q9GZQ6 430 aa17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 ATG5Q9H1Y0 275 aa17.96■□□□□ 0.47
ECHDC1-203ENST00000368291 HSD17B6O14756 317 aa17.95■□□□□ 0.46
ECHDC1-203ENST00000368291 REG1BP48304 166 aa17.95■□□□□ 0.46
ECHDC1-203ENST00000368291 HABP2Q14520 560 aaPredicted RBP17.95■□□□□ 0.46
ECHDC1-203ENST00000368291 LY6G6FQ5SQ64 297 aa17.95■□□□□ 0.46
ECHDC1-203ENST00000368291 STEAP3Q658P3 488 aa17.95■□□□□ 0.46
ECHDC1-203ENST00000368291 OR8H3Q8N146 312 aa17.95■□□□□ 0.46
ECHDC1-203ENST00000368291 DRAM1Q8N682 238 aa17.95■□□□□ 0.46
ECHDC1-203ENST00000368291 OR5H6Q8NGV6 325 aa17.95■□□□□ 0.46
ECHDC1-203ENST00000368291 OR56B4Q8NH76 319 aa17.95■□□□□ 0.46
ECHDC1-203ENST00000368291 ZNF702PQ9H963 129 aa17.95■□□□□ 0.46
ECHDC1-203ENST00000368291 HAX1O00165 279 aa17.94■□□□□ 0.46
ECHDC1-203ENST00000368291 HLA-DRB3P79483 266 aa17.94■□□□□ 0.46
ECHDC1-203ENST00000368291 IDNKQ5T6J7 187 aa17.94■□□□□ 0.46
ECHDC1-203ENST00000368291 SHISA2Q6UWI4 295 aa17.94■□□□□ 0.46
ECHDC1-203ENST00000368291 Q6ZS46 218 aa17.94■□□□□ 0.46
ECHDC1-203ENST00000368291 THNSL2Q86YJ6 484 aa17.94■□□□□ 0.46
ECHDC1-203ENST00000368291 OR4C13Q8NGP0 309 aa17.94■□□□□ 0.46
ECHDC1-203ENST00000368291 IL1F10Q8WWZ1 152 aa17.94■□□□□ 0.46
ECHDC1-203ENST00000368291 ABRACLQ9P1F3 81 aa17.94■□□□□ 0.46
ECHDC1-203ENST00000368291 ELF5Q9UKW6 265 aaPredicted RBP17.94■□□□□ 0.46
ECHDC1-203ENST00000368291 IGHV1-3A0A0C4DH29 117 aa17.93■□□□□ 0.46
ECHDC1-203ENST00000368291 GAPDHP04406 335 aaKnown RBP17.93■□□□□ 0.46
ECHDC1-203ENST00000368291 SCTP09683 121 aa17.93■□□□□ 0.46
ECHDC1-203ENST00000368291 RPS19P39019 145 aaKnown RBP17.93■□□□□ 0.46
ECHDC1-203ENST00000368291 BLCAPP62952 87 aa17.93■□□□□ 0.46
ECHDC1-203ENST00000368291 ODF3L1Q8IXM7 274 aa17.93■□□□□ 0.46
ECHDC1-203ENST00000368291 Q8N2B8 174 aa17.93■□□□□ 0.46
ECHDC1-203ENST00000368291 CAPSLQ8WWF8 208 aa17.93■□□□□ 0.46
ECHDC1-203ENST00000368291 RTN4IP1Q8WWV3 396 aaPredicted RBP17.93■□□□□ 0.46
ECHDC1-203ENST00000368291 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.93■□□□□ 0.465e-12■■■■■ 43.9
ECHDC1-203ENST00000368291 MGAT4AQ9UM21 535 aa17.93■□□□□ 0.46
ECHDC1-203ENST00000368291 A0A075B6Q4 140 aa17.92■□□□□ 0.46
ECHDC1-203ENST00000368291 SNRNP70P08621 437 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms