RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 IGFBP2P18065 325 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 FUT3P21217 361 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 VDAC1P21796 283 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 TAGLN2P37802 199 aaKnown RBP9.84□□□□□ -0.83
USF1-201ENST00000368019 RPS10P46783 165 aaKnown RBP9.84□□□□□ -0.83
USF1-201ENST00000368019 CYB561P49447 251 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 DSCR4P56555 118 aaPredicted RBP9.84□□□□□ -0.83
USF1-201ENST00000368019 TAS2R30P59541 319 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 VAMP2P63027 116 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 ICAM4Q14773 271 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 TAF9Q16594 264 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.84□□□□□ -0.83
USF1-201ENST00000368019 OR10G3Q8NGC4 313 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 OR10AD1Q8NGE0 317 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 NPRL2Q8WTW4 380 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 GTF3AQ92664 365 aaKnown RBP9.84□□□□□ -0.83
USF1-201ENST00000368019 REEP6Q96HR9 211 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 RASL10BQ96S79 203 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 P2RX4Q99571 388 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 NIPSNAP3BQ9BS92 247 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 PSMG3Q9BT73 122 aaPredicted RBP9.84□□□□□ -0.83
USF1-201ENST00000368019 C20orf24Q9BUV8 137 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 PARD6GQ9BYG4 376 aaPredicted RBP9.84□□□□□ -0.83
USF1-201ENST00000368019 ULBP2Q9BZM5 246 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 CTDSP1Q9GZU7 261 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 DOK5Q9P104 306 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 SLC7A11Q9UPY5 501 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 PUS1Q9Y606 427 aaKnown RBP eCLIP9.84□□□□□ -0.83
USF1-201ENST00000368019 WSB1Q9Y6I7 421 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 AKAP6Q13023 2319 aa9.84□□□□□ -0.83
USF1-201ENST00000368019 LOC102723971A0A1B0GUV8 181 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 hCG_38984A0A1B0GV85 526 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 OR6C6A6NF89 314 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 FAM24AA6NFZ4 105 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 PRRG2O14669 202 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 NRASP01111 189 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 HIST1H1BP16401 226 aaKnown RBP9.83□□□□□ -0.84
USF1-201ENST00000368019 AADACP22760 399 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 NPBWR2P48146 333 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 FHITP49789 147 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 RBM11P57052 281 aaKnown RBP9.83□□□□□ -0.84
USF1-201ENST00000368019 OR2B8PP59922 312 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 PCBD1P61457 104 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 SP6Q3SY56 376 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 NRN1LQ496H8 165 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 PHLDA2Q53GA4 152 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 LBHQ53QV2 105 aaPredicted RBP9.83□□□□□ -0.84
USF1-201ENST00000368019 NMSQ5H8A3 153 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 PHYHD1Q5SRE7 291 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 AKR1C8PQ5T2L2 129 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 H1FOOQ8IZA3 346 aaPredicted RBP9.83□□□□□ -0.84
USF1-201ENST00000368019 SELENOHQ8IZQ5 122 aaKnown RBP9.83□□□□□ -0.84
USF1-201ENST00000368019 OR5L1Q8NGL2 311 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 OR5D13Q8NGL4 314 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 OR1F12Q8NHA8 337 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 CLDND2Q8NHS1 167 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 FAM57AQ8TBR7 257 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 SPSB4Q96A44 273 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 PFDN5Q99471 154 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 ATP5SQ99766 215 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 DEFB126Q9BYW3 111 aa9.83□□□□□ -0.84
USF1-201ENST00000368019 RIMS4Q9H426 269 aaPredicted RBP9.83□□□□□ -0.84
USF1-201ENST00000368019 CISD1Q9NZ45 108 aaKnown RBP9.83□□□□□ -0.84
USF1-201ENST00000368019 CHCHD2Q9Y6H1 151 aaPredicted RBP9.83□□□□□ -0.84
USF1-201ENST00000368019 TRBV24-1A0A075B6N3 115 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 IGKV1-27A0A075B6S5 117 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 ZNF816-ZNF321PA0A0X1KG74 233 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 KIR2DS1A0A191URI9 304 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 NKX2-6A6NCS4 301 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 ZNF724A8MTY0 619 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 H0Y980 276 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 TUSC2O75896 110 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 OR2J2O76002 312 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 OPRM1P35372 400 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 KIR2DS4P43632 304 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 MEOX1P50221 254 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 FXYD4P59646 89 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 RAC1P63000 192 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 HLA-DRB3P79483 266 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 TFF3Q07654 80 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 KIR2DS1Q14954 304 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 MPV17LQ2QL34 196 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 SNAI3Q3KNW1 292 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 PYY3Q5JQD4 70 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 RIPPLY2Q5TAB7 128 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 MEX3BQ6ZN04 569 aaKnown RBP9.82□□□□□ -0.84
USF1-201ENST00000368019 LINC00596Q86U02 117 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 ZNF429Q86V71 674 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 ZNF695Q8IW36 515 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 C1orf87Q8N0U7 546 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 ZFP62Q8NB50 900 aaPredicted RBP9.82□□□□□ -0.84
USF1-201ENST00000368019 CA5BP1Q8WTZ4 195 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 MBD3L1Q8WWY6 194 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 CYYR1Q96J86 154 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 RAB40CQ96S21 281 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 TP53RKQ96S44 253 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 BCL2L14Q9BZR8 327 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 PARP12Q9H0J9 701 aaKnown RBP9.82□□□□□ -0.84
USF1-201ENST00000368019 TMEM38BQ9NVV0 291 aa9.82□□□□□ -0.84
USF1-201ENST00000368019 GFOD1Q9NXC2 390 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms