RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 GPR35Q9HC97 309 aa12.57□□□□□ -0.4
PRKN-204ENST00000366896 PITPNC1Q9UKF7 332 aa12.57□□□□□ -0.4
PRKN-204ENST00000366896 TP53TG5Q9Y2B4 290 aa12.57□□□□□ -0.4
PRKN-204ENST00000366896 LOC102723971A0A1B0GUV8 181 aa12.57□□□□□ -0.4
PRKN-204ENST00000366896 ZNF891A8MT65 544 aaPredicted RBP12.57□□□□□ -0.4
PRKN-204ENST00000366896 P04436 131 aa12.57□□□□□ -0.4
PRKN-204ENST00000366896 EDN3P14138 238 aa12.57□□□□□ -0.4
PRKN-204ENST00000366896 CD200P41217 278 aa12.57□□□□□ -0.4
PRKN-204ENST00000366896 JOSD1Q15040 202 aaPredicted RBP12.57□□□□□ -0.4
PRKN-204ENST00000366896 DPPA3Q6W0C5 159 aa12.57□□□□□ -0.4
PRKN-204ENST00000366896 ODF3L1Q8IXM7 274 aa12.57□□□□□ -0.4
PRKN-204ENST00000366896 DKK4Q9UBT3 224 aa12.57□□□□□ -0.4
PRKN-204ENST00000366896 CLDN34H7C241 214 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 DVL1O14640 695 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 PGA5P0DJD9 388 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 BTF3P20290 206 aaKnown RBP12.56□□□□□ -0.4
PRKN-204ENST00000366896 EPHA1P21709 976 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 NPBWR2P48146 333 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 DYNLT3P51808 116 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 FOXO1Q12778 655 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 PNRC1Q12796 327 aaPredicted RBP12.56□□□□□ -0.4
PRKN-204ENST00000366896 C4orf17Q53FE4 359 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 FAM90A2PQ658T7 463 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 LURAP1Q96LR2 239 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 CALHM2Q9HA72 323 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 CELSR3Q9NYQ7 3312 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 MED13Q9UHV7 2174 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 TRBV24-1A0A075B6N3 115 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 A0A1B0GU03 582 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 A8MWP6 167 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 SSSCA1O60232 199 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 CYTIPO60759 359 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 CYB5R3P00387 301 aaPredicted RBP12.56□□□□□ -0.4
PRKN-204ENST00000366896 IGHV3-9P01782 118 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 RUNX1Q01196 453 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 WIPI1Q5MNZ9 446 aaPredicted RBP12.56□□□□□ -0.4
PRKN-204ENST00000366896 BEND4Q6ZU67 534 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 CMTM1Q8IZ96 169 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 OR10D3Q8NH80 312 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 RNASEH2CQ8TDP1 164 aaKnown RBP12.56□□□□□ -0.4
PRKN-204ENST00000366896 SNX22Q96L94 193 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 ZNF442Q9H7R0 627 aa12.56□□□□□ -0.4
PRKN-204ENST00000366896 PIGBOS1A0A0B4J2F0 54 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 LRRC3CA6NJW4 275 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 OR7C1O76099 320 aaPredicted RBP12.55□□□□□ -0.4
PRKN-204ENST00000366896 NAPSAO96009 420 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 FGF7P21781 194 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 GNRHRP30968 328 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 SLC25A26Q70HW3 274 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 ZNF611Q8N823 705 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 IL22RA2Q969J5 263 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 NEU1Q99519 415 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 CDH20Q9HBT6 801 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 SSUH2Q9Y2M2 353 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 TRAV1-1A0A0B4J248 108 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 CTXN2P0C2S0 81 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 RAB4BP61018 213 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 VAMP2P63027 116 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 BAXQ07812 192 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 P4HA3Q7Z4N8 544 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 TMEM183AQ8IXX5 376 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 ABHD3Q8WU67 409 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 ZNF845Q96IR2 970 aaPredicted RBP12.55□□□□□ -0.4
PRKN-204ENST00000366896 GPHA2Q96T91 129 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 Q9N2K0 584 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 CRIM1Q9NZV1 1036 aa12.55□□□□□ -0.4
PRKN-204ENST00000366896 TUSC2O75896 110 aa12.54□□□□□ -0.4
PRKN-204ENST00000366896 CST7O76096 145 aa12.54□□□□□ -0.4
PRKN-204ENST00000366896 GZMBP10144 247 aa12.54□□□□□ -0.4
PRKN-204ENST00000366896 CPEB3Q8NE35 698 aaKnown RBP12.54□□□□□ -0.4
PRKN-204ENST00000366896 NOL4LQ96MY1 436 aaPredicted RBP12.54□□□□□ -0.4
PRKN-204ENST00000366896 LINC00470Q9BZP3 86 aa12.54□□□□□ -0.4
PRKN-204ENST00000366896 MAGT1Q9H0U3 335 aa12.54□□□□□ -0.4
PRKN-204ENST00000366896 IGKV3D-15A0A087WSY6 115 aa12.54□□□□□ -0.4
PRKN-204ENST00000366896 TRAPPC6AO75865 159 aa12.54□□□□□ -0.4
PRKN-204ENST00000366896 TK1P04183 234 aa12.54□□□□□ -0.4
PRKN-204ENST00000366896 COX5BP10606 129 aa12.54□□□□□ -0.4
PRKN-204ENST00000366896 UCP1P25874 307 aa12.54□□□□□ -0.4
PRKN-204ENST00000366896 FGF12P61328 243 aa12.54□□□□□ -0.4
PRKN-204ENST00000366896 MPV17LQ2QL34 196 aa12.54□□□□□ -0.4
PRKN-204ENST00000366896 CXorf66Q5JRM2 361 aaPredicted RBP12.54□□□□□ -0.4
PRKN-204ENST00000366896 EXTL1Q92935 676 aa12.54□□□□□ -0.4
PRKN-204ENST00000366896 RAB24Q969Q5 203 aa12.54□□□□□ -0.4
PRKN-204ENST00000366896 HS3ST6Q96QI5 342 aa12.54□□□□□ -0.4
PRKN-204ENST00000366896 REPIN1Q9BWE0 567 aaKnown RBP12.54□□□□□ -0.4
PRKN-204ENST00000366896 ACTR3CQ9C0K3 210 aaPredicted RBP12.54□□□□□ -0.4
PRKN-204ENST00000366896 DEPPQ9NTK1 212 aa12.54□□□□□ -0.4
PRKN-204ENST00000366896 TMEM50AO95807 157 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 APC2O95996 2303 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 SOX8P57073 446 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 TAS2R30P59541 319 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 RAB11AP62491 216 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 ID3Q02535 119 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 ZNF695Q8IW36 515 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 SELENOHQ8IZQ5 122 aaKnown RBP12.53□□□□□ -0.4
PRKN-204ENST00000366896 NDUFAF3Q9BU61 184 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 FGF23Q9GZV9 251 aaPredicted RBP12.53□□□□□ -0.4
PRKN-204ENST00000366896 SLC7A10Q9NS82 523 aa12.53□□□□□ -0.4
PRKN-204ENST00000366896 CISD1Q9NZ45 108 aaKnown RBP12.53□□□□□ -0.4
PRKN-204ENST00000366896 CEP295Q9C0D2 2601 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms