RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 LDLRAD3Q86YD5 345 aa9.17□□□□□ -0.94
H3F3A-202ENST00000366814 H1FOOQ8IZA3 346 aaPredicted RBP9.17□□□□□ -0.94
H3F3A-202ENST00000366814 OR10Z1Q8NGY1 313 aa9.17□□□□□ -0.94
H3F3A-202ENST00000366814 LILRB1Q8NHL6 650 aaPredicted RBP9.17□□□□□ -0.94
H3F3A-202ENST00000366814 PLPPR1Q8TBJ4 325 aa9.17□□□□□ -0.94
H3F3A-202ENST00000366814 LRRC20Q8TCA0 184 aa9.17□□□□□ -0.94
H3F3A-202ENST00000366814 MSI2Q96DH6 328 aaKnown RBP9.17□□□□□ -0.94
H3F3A-202ENST00000366814 DNTTIP1Q9H147 329 aa9.17□□□□□ -0.94
H3F3A-202ENST00000366814 PLEKHA2Q9HB19 425 aa9.17□□□□□ -0.94
H3F3A-202ENST00000366814 UFSP2Q9NUQ7 469 aa9.17□□□□□ -0.94
H3F3A-202ENST00000366814 MED9Q9NWA0 146 aa9.17□□□□□ -0.94
H3F3A-202ENST00000366814 OR5AC2Q9NZP5 309 aa9.17□□□□□ -0.94
H3F3A-202ENST00000366814 Q9UFV3 132 aa9.17□□□□□ -0.94
H3F3A-202ENST00000366814 WIPI2Q9Y4P8 454 aa9.17□□□□□ -0.94
H3F3A-202ENST00000366814 RBM7Q9Y580 266 aaKnown RBP9.17□□□□□ -0.94
H3F3A-202ENST00000366814 IGKV1-6A0A0C4DH72 117 aa9.16□□□□□ -0.94
H3F3A-202ENST00000366814 H0YIZ8 118 aa9.16□□□□□ -0.94
H3F3A-202ENST00000366814 DEDDO75618 318 aa9.16□□□□□ -0.94
H3F3A-202ENST00000366814 CDS2O95674 445 aa9.16□□□□□ -0.94
H3F3A-202ENST00000366814 SLC35E4Q6ICL7 350 aa9.16□□□□□ -0.94
H3F3A-202ENST00000366814 ZNF826PQ6ZT77 177 aa9.16□□□□□ -0.94
H3F3A-202ENST00000366814 LYZL2Q7Z4W2 148 aa9.16□□□□□ -0.94
H3F3A-202ENST00000366814 C11orf53Q8IXP5 236 aa9.16□□□□□ -0.94
H3F3A-202ENST00000366814 OR10V1Q8NGI7 309 aa9.16□□□□□ -0.94
H3F3A-202ENST00000366814 OR1S1Q8NH92 325 aa9.16□□□□□ -0.94
H3F3A-202ENST00000366814 STOML3Q8TAV4 291 aa9.16□□□□□ -0.94
H3F3A-202ENST00000366814 PCNPQ8WW12 178 aaKnown RBP9.16□□□□□ -0.94
H3F3A-202ENST00000366814 SHARPINQ9H0F6 387 aa9.16□□□□□ -0.94
H3F3A-202ENST00000366814 CCL28Q9NRJ3 127 aa9.16□□□□□ -0.94
H3F3A-202ENST00000366814 MBNL3Q9NUK0 354 aaKnown RBP9.16□□□□□ -0.94
H3F3A-202ENST00000366814 LSM5Q9Y4Y9 91 aaKnown RBP9.16□□□□□ -0.94
H3F3A-202ENST00000366814 CELSR2Q9HCU4 2923 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 OOEPA6NGQ2 149 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 E5RGE8 158 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 H0Y980 276 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 C16orf97H3BN30 126 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 K7EPK0 472 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 NMBP08949 121 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 SNTB1Q13884 538 aaKnown RBP9.15□□□□□ -0.94
H3F3A-202ENST00000366814 THOC7Q6I9Y2 204 aaKnown RBP9.15□□□□□ -0.94
H3F3A-202ENST00000366814 EIF5AL1Q6IS14 154 aaKnown RBP9.15□□□□□ -0.94
H3F3A-202ENST00000366814 TMEM108Q6UXF1 575 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 FAM90A1Q86YD7 464 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 PRR18Q8N4B5 295 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 FAM71E2Q8N5Q1 922 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 SLC35G3Q8N808 338 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 PPP1R35Q8TAP8 253 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 LRRC29Q8WV35 223 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 IL22RA2Q969J5 263 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 TMEM56Q96MV1 263 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 TP53RKQ96S44 253 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 NSG2Q9Y328 171 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 TMEM56-RWDD3S4R434 201 aa9.15□□□□□ -0.94
H3F3A-202ENST00000366814 HEATR1Q9H583 2144 aaKnown RBP9.15□□□□□ -0.94
H3F3A-202ENST00000366814 IGKV1D-13A0A0B4J2D9 117 aa9.15□□□□□ -0.95
H3F3A-202ENST00000366814 I3L521 148 aa9.15□□□□□ -0.95
H3F3A-202ENST00000366814 ST8SIA3O43173 380 aa9.15□□□□□ -0.95
H3F3A-202ENST00000366814 IGKV1-13P0DP09 117 aa9.15□□□□□ -0.95
H3F3A-202ENST00000366814 TNFSF4P23510 183 aa9.15□□□□□ -0.95
H3F3A-202ENST00000366814 RPL12P30050 165 aaKnown RBP9.15□□□□□ -0.95
H3F3A-202ENST00000366814 NKX6-1P78426 367 aaPredicted RBP9.15□□□□□ -0.95
H3F3A-202ENST00000366814 FAM27E3Q08E93 113 aa9.15□□□□□ -0.95
H3F3A-202ENST00000366814 GNMTQ14749 295 aa9.15□□□□□ -0.95
H3F3A-202ENST00000366814 HMGN3Q15651 99 aa9.15□□□□□ -0.95
H3F3A-202ENST00000366814 TRAT1Q6PIZ9 186 aa9.15□□□□□ -0.95
H3F3A-202ENST00000366814 VHLLQ6RSH7 139 aa9.15□□□□□ -0.95
H3F3A-202ENST00000366814 BVESQ8NE79 360 aa9.15□□□□□ -0.95
H3F3A-202ENST00000366814 OR5D13Q8NGL4 314 aa9.15□□□□□ -0.95
H3F3A-202ENST00000366814 NINJ1Q92982 152 aa9.15□□□□□ -0.95
H3F3A-202ENST00000366814 GALMQ96C23 342 aa9.15□□□□□ -0.95
H3F3A-202ENST00000366814 RRNAD1Q96FB5 475 aaKnown RBP9.15□□□□□ -0.95
H3F3A-202ENST00000366814 AKR1E2Q96JD6 320 aa9.15□□□□□ -0.95
H3F3A-202ENST00000366814 TAF9BQ9HBM6 251 aa9.15□□□□□ -0.95
H3F3A-202ENST00000366814 ITPR2Q14571 2701 aa9.14□□□□□ -0.95
H3F3A-202ENST00000366814 RNF212BA8MTL3 300 aa9.14□□□□□ -0.95
H3F3A-202ENST00000366814 WNT9BO14905 357 aa9.14□□□□□ -0.95
H3F3A-202ENST00000366814 PTBP3O95758 552 aaKnown RBP9.14□□□□□ -0.95
H3F3A-202ENST00000366814 PVALBP20472 110 aaPredicted RBP9.14□□□□□ -0.95
H3F3A-202ENST00000366814 PTAFRP25105 342 aa9.14□□□□□ -0.95
H3F3A-202ENST00000366814 UCP1P25874 307 aa9.14□□□□□ -0.95
H3F3A-202ENST00000366814 CD40P25942 277 aa9.14□□□□□ -0.95
H3F3A-202ENST00000366814 IL2RGP31785 369 aa9.14□□□□□ -0.95
H3F3A-202ENST00000366814 BAP18Q8IXM2 172 aa9.14□□□□□ -0.95
H3F3A-202ENST00000366814 RBPMSQ93062 196 aaKnown RBP9.14□□□□□ -0.95
H3F3A-202ENST00000366814 SPOCK3Q9BQ16 436 aa9.14□□□□□ -0.95
H3F3A-202ENST00000366814 IGLV3-9A0A075B6K5 115 aa9.13□□□□□ -0.95
H3F3A-202ENST00000366814 SRRM5B3KS81 715 aa9.13□□□□□ -0.95
H3F3A-202ENST00000366814 ATP6V1G2-DDX39BF2Z307 99 aa9.13□□□□□ -0.95
H3F3A-202ENST00000366814 PGLYRP1O75594 196 aaPredicted RBP9.13□□□□□ -0.95
H3F3A-202ENST00000366814 MBPP02686 304 aaPredicted RBP9.13□□□□□ -0.95
H3F3A-202ENST00000366814 SERPINE2P07093 398 aa9.13□□□□□ -0.95
H3F3A-202ENST00000366814 WNT2P09544 360 aa9.13□□□□□ -0.95
H3F3A-202ENST00000366814 VDAC1P21796 283 aa9.13□□□□□ -0.95
H3F3A-202ENST00000366814 F2RP25116 425 aa9.13□□□□□ -0.95
H3F3A-202ENST00000366814 CFHR2P36980 270 aa9.13□□□□□ -0.95
H3F3A-202ENST00000366814 GABRA2P47869 451 aa9.13□□□□□ -0.95
H3F3A-202ENST00000366814 CEBPDP49716 269 aaPredicted RBP9.13□□□□□ -0.95
H3F3A-202ENST00000366814 AANATQ16613 207 aa9.13□□□□□ -0.95
H3F3A-202ENST00000366814 C5orf24Q7Z6I8 188 aa9.13□□□□□ -0.95
H3F3A-202ENST00000366814 TMEM171Q8WVE6 324 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms