RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 HSPB6O14558 160 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 FABP7O15540 132 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 HKR1P10072 659 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 ANXA3P12429 323 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 TNFRSF1AP19438 455 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 ZBTB25P24278 435 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 PPOXP50336 477 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 NPY4RP50391 375 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 UCP3P55916 312 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 GMFBP60983 142 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 SPRNQ5BIV9 151 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 SLC35E4Q6ICL7 350 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 LYG2Q86SG7 212 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 ZCCHC24Q8N2G6 241 aaKnown RBP9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 MUC20Q8N307 709 aaPredicted RBP9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 OR52B4Q8NGK2 314 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 OR4A4PQ8NGN8 299 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 OR11L1Q8NGX0 322 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 CAPSLQ8WWF8 208 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 FYTTD1Q96QD9 318 aaKnown RBP9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 RTBDNQ9BSG5 229 aaPredicted RBP9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 RAB1BQ9H0U4 201 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 C5orf66Q9H5L9 145 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 GCM1Q9NP62 436 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 ESM1Q9NQ30 184 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 MBNL3Q9NUK0 354 aaKnown RBP9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 PGPEP1Q9NXJ5 209 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 OR14J1Q9UGF5 321 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 WIPI2Q9Y4P8 454 aa9.31□□□□□ -0.92
CSNK1E-202ENST00000366216 TMEM30CPA0ZSE6 113 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 C9orf170A2RU37 121 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 PSPNO60542 156 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 DIRAS3O95661 229 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 AVPP01185 164 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 CTSDP07339 412 aaPredicted RBP9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 PSG2P11465 335 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 CXCL3P19876 107 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 PRDX2P32119 198 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 SEC61A1P61619 476 aaKnown RBP9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 HLA-DRB3P79483 266 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 DHRS2Q13268 280 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 ZFP69Q49AA0 526 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 TMEM128Q5BJH2 165 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 C17orf107Q6ZR85 190 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 C12orf45Q8N5I9 185 aaPredicted RBP9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 OR2AK2Q8NG84 335 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 PPP1R35Q8TAP8 253 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 PLPPR1Q8TBJ4 325 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 ZFAND1Q8TCF1 268 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 MOB3AQ96BX8 217 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 CABLES2Q9BTV7 478 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 EGLN1Q9GZT9 426 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 MS4A5Q9H3V2 200 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 DNAJB11Q9UBS4 358 aa9.3□□□□□ -0.92
CSNK1E-202ENST00000366216 NPIPB11E5RHQ5 1161 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 LYNX1G3V0Z9 82 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 C1QBP02746 253 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 TK1P04183 234 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 MSMBP08118 114 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 SCTP09683 121 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 LYNX1P0DP58 116 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 IRF2P14316 349 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 PGAM2P15259 253 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 ZFP36P26651 326 aaKnown RBP9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 FCGR2CP31995 323 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 OR3A1P47881 315 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 CEBPDP49716 269 aaPredicted RBP9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 UBA52P62987 128 aaKnown RBP9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 COL10A1Q03692 680 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 PPP1R1AQ13522 171 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 HMGN3Q15651 99 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 IGSF11Q5DX21 431 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 TEX29Q8N6K0 151 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 CD177Q8N6Q3 437 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 DRAXINQ8NBI3 349 aaPredicted RBP9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 ADAD2Q8NCV1 583 aaKnown RBP9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 MITD1Q8WV92 249 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 NEU4Q8WWR8 484 aaPredicted RBP9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 ASB13Q8WXK3 278 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 TMEM230Q96A57 120 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 SNX22Q96L94 193 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 ZNF436Q9C0F3 470 aaPredicted RBP9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 FXYD6Q9H0Q3 95 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 NCOR1P1Q9H4R4 102 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 UNKLQ9H9P5 680 aaKnown RBP9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 LPAR2Q9HBW0 351 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 MGAT4CQ9UBM8 478 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 ZNF222Q9UK12 451 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 FBXO9Q9UK97 447 aaPredicted RBP9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 TRAPPC2LQ9UL33 140 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 PPP1R3CQ9UQK1 317 aa9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 C14orf166Q9Y224 244 aaKnown RBP9.29□□□□□ -0.92
CSNK1E-202ENST00000366216 IGKV1D-17A0A075B6S4 117 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 LOC105371242A0A075B767 164 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 TRBV6-7A0A0A0MS04 114 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 A0A0B4J2A0 478 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 LRRC30A6NM36 301 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 ZNF737O75373 536 aa9.28□□□□□ -0.92
CSNK1E-202ENST00000366216 TUSC2O75896 110 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms